| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3677 |
|---|
| Symbol | nikC |
|---|
| ID | 5592776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 3662452 |
|---|
| End bp | 3663285 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640922793 |
|---|
| Product | nickel transporter permease NikC |
|---|
| Protein accession | YP_001460273 |
|---|
| Protein GI | 157162955 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTTT TCCTCTCTTC CCGCTGGTCG GTACGCCTGG CGCTGATCAT TATCGCCCTG
CTGGCGCTGA TTGCGCTCAC CAGCCAGTGG TGGCTGCCGT ATGACCCCCT GGCGATTGAT
TTGCCGTCGC GCCTGCTTTC GCCGGATGCG CAGCACTGGC TGGGCACCGA TCACTTAGGT
CGCGATATTT TCTCGCGGCT GATGGCAGCG ACCCGCGTGT CGCTCGGTTC GGTAATGGCC
TGCCTGCTGC TGGTGCTGAC ATTAGGGCTG GTTATTGGCG GCAGCGCCGG GTTGATTGGC
GGGCGCGTTG ATCAGGCCAC CATGCGCGTC GCCGATATGT TTATGACCTT CCCGACCTCG
ATTCTGTCGT TCTTTATGGT TGGCGTGCTC GGCACCGGGC TGACCAACGT AATTATCGCC
ATCGCCCTGT CGCACTGGGC GTGGTATGCA CGCATGGTGC GCAGCCTGGT GATTTCACTA
CGCCAACGCG AGTTTGTGCT GGCGTCACGG CTTTCCGGTG CGGGCCATGT GCGGGTGTTT
GTCGATCATC TGGCAGGCGC GGTGATCCCT TCGCTGCTGG TGCTGGCAAC GCTGGATATC
GGCCATATGA TGCTGCACGT CGCGGGGATG TCTTTCCTTG GCCTCGGTGT GACCGCGCCG
ACCGCCGAAT GGGGCGTGAT GATTAACGAC GCGCGCCAGT ATATCTGGAC CCAGCCGCTG
CAAATGTTCT GGCCGGGGCT GGCGCTGTTT ATCAGCGTGA TGGCCTTTAA CCTGGTGGGT
GACGCACTGC GCGATCATCT GGACCCTCAT CTGGTGACGG AGCACGCACA CTAA
|
|---|
| Protein sequence | MNFFLSSRWS VRLALIIIAL LALIALTSQW WLPYDPLAID LPSRLLSPDA QHWLGTDHLG
RDIFSRLMAA TRVSLGSVMA CLLLVLTLGL VIGGSAGLIG GRVDQATMRV ADMFMTFPTS
ILSFFMVGVL GTGLTNVIIA IALSHWAWYA RMVRSLVISL RQREFVLASR LSGAGHVRVF
VDHLAGAVIP SLLVLATLDI GHMMLHVAGM SFLGLGVTAP TAEWGVMIND ARQYIWTQPL
QMFWPGLALF ISVMAFNLVG DALRDHLDPH LVTEHAH
|
|---|
| |