Gene EcHS_A3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3648 
Symbol 
ID5594088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3635440 
End bp3636285 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID640922765 
Productglycerol-3-phosphate transporter membrane protein 
Protein accessionYP_001460245 
Protein GI157162927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGA ACCGTCCGTG GCTGACGATA TTCAGCCATA CCATGCTGAT CCTCGGGATC 
GCGGTGATCC TCTTCCCGCT GTACGTGGCG TTTGTCGCGG CGACGCTGGA TAAACAGGCC
GTCTATGCCG CGCCGATGAC GCTCATCCCC GGCACACATC TGCTGGAAAA CATCCACAAC
ATCTGGGTGA ACGGGGTAGG CACGAATAGC GCGCCGTTCT GGCGGATGTT GCTTAACAGC
TTTGTGATGG CGTTCAGCAT TACGCTCGGC AAAATTACCG TCTCGATGCT CTCGGCATTT
GCCATTGTCT GGTTTCGTTT TCCGCTACGT AACCTCTTCT TCTGGATGAT TTTTATCACC
CTGATGCTGC CGGTTGAAGT ACGTATCTTC CCGACGGTGG AAGTCATCGC CAACCTGAAG
ATGCTCGACA GCTACGCCGG TTTAACGCTG CCGCTGATGG CCTCGGCGAC CGCCACGTTT
CTGTTTCGCC AGTTCTTTAT GACGCTGCCG GATGAACTGG TGGAAGCGGC GCGGATCGAC
GGCGCGTCAC CAATGCGTTT CTTTTGCGAC ATCGTTTTTC CGCTCTCCAA AACCAATCTG
GCGGCGCTGT TTGTGATCAC CTTTATTTAC GGCTGGAACC AGTATTTGTG GCCGTTGTTG
ATTATTACCG ATGTGGATCT CGGCACCACC GTGGCAGGGA TCAAAGGGAT GATCGCTACA
GGCGAAGGCA CCACGGAATG GAACTCAGTG ATGGCGGCGA TGTTGTTAAC GCTTATCCCT
CCGGTGGTGA TTGTTTTAGT GATGCAGCGT GCCTTCGTGC GCGGCCTGGT CGATAGTGAG
AAATAA
 
Protein sequence
MIENRPWLTI FSHTMLILGI AVILFPLYVA FVAATLDKQA VYAAPMTLIP GTHLLENIHN 
IWVNGVGTNS APFWRMLLNS FVMAFSITLG KITVSMLSAF AIVWFRFPLR NLFFWMIFIT
LMLPVEVRIF PTVEVIANLK MLDSYAGLTL PLMASATATF LFRQFFMTLP DELVEAARID
GASPMRFFCD IVFPLSKTNL AALFVITFIY GWNQYLWPLL IITDVDLGTT VAGIKGMIAT
GEGTTEWNSV MAAMLLTLIP PVVIVLVMQR AFVRGLVDSE K