Gene EcHS_A3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3618 
SymbolrtcB 
ID5594400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3601128 
End bp3602354 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content51% 
IMG OID640922735 
ProductRtcB protein 
Protein accessionYP_001460216 
Protein GI157162898 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG AATTACTGAC CACTGAAAAT GCCCCGGTAA AAATGTGGAC CAAAGGCGTG 
CCGGTAGAAG CCGATGCGCG TCAGCAACTT ATTAATACGG CGAAGATGCC GTTTATTTTC
AAACACATTG CGGTAATGCC TGATGTACAC CTGGGTAAAG GTTCCACCAT TGGTAGCGTG
ATCCCGACCA AAGGGGCGAT TATTCCGGCG GCGGTGGGCG TGGATATTGG CTGTGGAATG
AACGCGCTGC GTACCGCGTT AACGGCGGCA GACCTGCCTG AAAACCTGGC AGAGCTGCGT
CAGGCGATTG AAACGGCCGT GCCGCACGGG CGTACCACTG GCCGTTGTAA ACGTGATAAA
GGCGCATGGG AAAACCCGCC TGTTAACGTC GATGCGAAAT GGGCTGAGCT TGAAGCCGGT
TATCAGTGGT TAACGCAAAA ATATCCCCGT TTCCTGAATA CCAATAACTA TAAACACCTG
GGAACGCTGG GAACCGGTAA CCACTTTATT GAAATCTGCC TTGATGAGTC GGAGCAGGTG
TGGATTATGC TGCACTCCGG TTCACGCGGA ATTGGTAACG CCATCGGGAC TTACTTTATC
GATCTGGCAC AAAAAGAGAT GCAGGAAACG CTTGAGACGT TGCCGTCGCG TGATCTGGCG
TACTTTATGG AAGGTACGGA ATACTTTGAT GATTACCTGA AAGCCGTGGC CTGGGCGCAG
CTTTTTGCCA GCCTTAACCG CGATGCGATG ATGGAAAACG TGGTAACGGC ATTGCAGAGC
ATTACGCAGA AAACGGTCAG ACAGCCACAA ACGCTGGCGA TGGAAGAGAT CAACTGTCAC
CACAACTATG TGCAAAAAGA ACAGCACTTT GGTGAAGAGA TCTACGTGAC GCGTAAAGGC
GCGGTGTCTG CGCGTGCTGG TCAATATGGA ATTATTCCCG GTTCGATGGG AGCGAAAAGC
TTTATCGTCC GTGGGTTGGG AAATGAAGAG TCGTTCTGTT CGTGCAGCCA CGGTGCCGGG
CGGGTAATGA GCCGTACTAA AGCGAAAAAA CTGTTCAGCG TGGAAGATCA AATTCGTGCC
ACCGCGCATG TGGAATGCCG TAAAGATGCC GAAGTGATCG ACGAAATCCC GATGGCGTAT
AAAGATATTG ATGCGGTGAT GGCGGCACAA AGCGATCTGG TGGAAGTTAT CTACACCCTG
CGTCAGGTGG TGTGCGTAAA AGGATAA
 
Protein sequence
MNYELLTTEN APVKMWTKGV PVEADARQQL INTAKMPFIF KHIAVMPDVH LGKGSTIGSV 
IPTKGAIIPA AVGVDIGCGM NALRTALTAA DLPENLAELR QAIETAVPHG RTTGRCKRDK
GAWENPPVNV DAKWAELEAG YQWLTQKYPR FLNTNNYKHL GTLGTGNHFI EICLDESEQV
WIMLHSGSRG IGNAIGTYFI DLAQKEMQET LETLPSRDLA YFMEGTEYFD DYLKAVAWAQ
LFASLNRDAM MENVVTALQS ITQKTVRQPQ TLAMEEINCH HNYVQKEQHF GEEIYVTRKG
AVSARAGQYG IIPGSMGAKS FIVRGLGNEE SFCSCSHGAG RVMSRTKAKK LFSVEDQIRA
TAHVECRKDA EVIDEIPMAY KDIDAVMAAQ SDLVEVIYTL RQVVCVKG