Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3618 |
Symbol | rtcB |
ID | 5594400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3601128 |
End bp | 3602354 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640922735 |
Product | RtcB protein |
Protein accession | YP_001460216 |
Protein GI | 157162898 |
COG category | [S] Function unknown |
COG ID | [COG1690] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTACG AATTACTGAC CACTGAAAAT GCCCCGGTAA AAATGTGGAC CAAAGGCGTG CCGGTAGAAG CCGATGCGCG TCAGCAACTT ATTAATACGG CGAAGATGCC GTTTATTTTC AAACACATTG CGGTAATGCC TGATGTACAC CTGGGTAAAG GTTCCACCAT TGGTAGCGTG ATCCCGACCA AAGGGGCGAT TATTCCGGCG GCGGTGGGCG TGGATATTGG CTGTGGAATG AACGCGCTGC GTACCGCGTT AACGGCGGCA GACCTGCCTG AAAACCTGGC AGAGCTGCGT CAGGCGATTG AAACGGCCGT GCCGCACGGG CGTACCACTG GCCGTTGTAA ACGTGATAAA GGCGCATGGG AAAACCCGCC TGTTAACGTC GATGCGAAAT GGGCTGAGCT TGAAGCCGGT TATCAGTGGT TAACGCAAAA ATATCCCCGT TTCCTGAATA CCAATAACTA TAAACACCTG GGAACGCTGG GAACCGGTAA CCACTTTATT GAAATCTGCC TTGATGAGTC GGAGCAGGTG TGGATTATGC TGCACTCCGG TTCACGCGGA ATTGGTAACG CCATCGGGAC TTACTTTATC GATCTGGCAC AAAAAGAGAT GCAGGAAACG CTTGAGACGT TGCCGTCGCG TGATCTGGCG TACTTTATGG AAGGTACGGA ATACTTTGAT GATTACCTGA AAGCCGTGGC CTGGGCGCAG CTTTTTGCCA GCCTTAACCG CGATGCGATG ATGGAAAACG TGGTAACGGC ATTGCAGAGC ATTACGCAGA AAACGGTCAG ACAGCCACAA ACGCTGGCGA TGGAAGAGAT CAACTGTCAC CACAACTATG TGCAAAAAGA ACAGCACTTT GGTGAAGAGA TCTACGTGAC GCGTAAAGGC GCGGTGTCTG CGCGTGCTGG TCAATATGGA ATTATTCCCG GTTCGATGGG AGCGAAAAGC TTTATCGTCC GTGGGTTGGG AAATGAAGAG TCGTTCTGTT CGTGCAGCCA CGGTGCCGGG CGGGTAATGA GCCGTACTAA AGCGAAAAAA CTGTTCAGCG TGGAAGATCA AATTCGTGCC ACCGCGCATG TGGAATGCCG TAAAGATGCC GAAGTGATCG ACGAAATCCC GATGGCGTAT AAAGATATTG ATGCGGTGAT GGCGGCACAA AGCGATCTGG TGGAAGTTAT CTACACCCTG CGTCAGGTGG TGTGCGTAAA AGGATAA
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Protein sequence | MNYELLTTEN APVKMWTKGV PVEADARQQL INTAKMPFIF KHIAVMPDVH LGKGSTIGSV IPTKGAIIPA AVGVDIGCGM NALRTALTAA DLPENLAELR QAIETAVPHG RTTGRCKRDK GAWENPPVNV DAKWAELEAG YQWLTQKYPR FLNTNNYKHL GTLGTGNHFI EICLDESEQV WIMLHSGSRG IGNAIGTYFI DLAQKEMQET LETLPSRDLA YFMEGTEYFD DYLKAVAWAQ LFASLNRDAM MENVVTALQS ITQKTVRQPQ TLAMEEINCH HNYVQKEQHF GEEIYVTRKG AVSARAGQYG IIPGSMGAKS FIVRGLGNEE SFCSCSHGAG RVMSRTKAKK LFSVEDQIRA TAHVECRKDA EVIDEIPMAY KDIDAVMAAQ SDLVEVIYTL RQVVCVKG
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