Gene EcHS_A3617 details

Gene Information

• Locus tag: EcHS_A3617
• Symbol: rtcA
• ID: 5594399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3600108
• End bp: 3601124
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640922734
• Product: RNA 3'-terminal-phosphate cyclase
• Protein accession: YP_001460215
• Protein GI: 157162897
• COG category: [A] RNA processing and modification
• COG ID: [COG0430] RNA 3'-terminal phosphate cyclase
• TIGRFAM ID: [TIGR03399] RNA 3'-phosphate cyclase

Plasmid Coverage information

• Num covering plasmid clones: 72
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGA TGATTGCGCT GGATGGCGCA CAGGGCGAAG GCGGCGGACA GATCCTGCGC 
TCGGCGCTGA GCCTGTCGAT GATAACCGGC CAGCCATTTA CCATCACTGG CATTCGAGCC 
GGACGGGCGA AACCGGGGCT GCTGCGCCAG CATCTGACCG CGGTAAAAGC GGCTGCGGAA 
ATTTGTAGGG CAACGGTGGA AGGTGCGGAG CTGGGATCGC AGCGTCTGCT CTTCCGGCCT 
GGCACCGTGC GGGGCGGCGA TTACCGCTTT GCTATCGGTA GCGCCGGAAG TTGTACGCTG 
GTGCTGCAAA CTGTGCTGCC CGCGCTGTGG TTTGCCGATG GACCTTCGCG TGTTGAAGTG 
AGCGGCGGTA CCGATAACCC GTCGGCGCCA CCTGCGGATT TTATCCGCCG GGTGCTGGAG 
CCGCTGCTGG CGAAAATGGG AATTCATCAG CAAACCACGC TGTTACGCCA CGGTTTTTAC 
CCTGCCGGAG GCGGTGTGGT GGCAACGGAA GTCTCGCCCG TGGCATCGTT TAACACCTTG 
CAACTTGGCG AGCGCGGGAA CATTGTGCAG ATGCGTGGAG AAGTTCTATT AGCTGGTGTG 
CCGCGCCATG TTGCTGAGCG TGAAATCGCT ACACTGGCGG GGAGTTTTTC CCTGCATGAA 
CAGAATATTC ATAACCTGCC GCGCGACCAG GGGCCGGGTA ATACCGTCTC GCTTGAAGTC 
GAAAGTGAAA ATATCACCGA ACGCTTTTTT GTCGTCGGTG AAAAGCGCGT CAGTGCCGAG 
GTGGTTGCGG CACAGTTGGT GAAAGAGGTG AAACGCTACC TGGCAAGCAC GGCGGCGGTG 
GGGGAATATC TTGCTGACCA ACTGGTGCTA CCGATGGCGC TGGCGGGCGC GGGGGAATTT 
ACGGTCGCCC ATCCCTCATG CCATCTGCTG ACCAATATCG CGGTGGTGGA GCGTTTCTTG 
CCGGTGCGGT TTAGTTTGAT AGAAACAGAT GGCGTAACGC GGGTGAGCAT TGAATGA 

 

Protein sequence

MKRMIALDGA QGEGGGQILR SALSLSMITG QPFTITGIRA GRAKPGLLRQ HLTAVKAAAE 
ICRATVEGAE LGSQRLLFRP GTVRGGDYRF AIGSAGSCTL VLQTVLPALW FADGPSRVEV 
SGGTDNPSAP PADFIRRVLE PLLAKMGIHQ QTTLLRHGFY PAGGGVVATE VSPVASFNTL 
QLGERGNIVQ MRGEVLLAGV PRHVAEREIA TLAGSFSLHE QNIHNLPRDQ GPGNTVSLEV 
ESENITERFF VVGEKRVSAE VVAAQLVKEV KRYLASTAAV GEYLADQLVL PMALAGAGEF 
TVAHPSCHLL TNIAVVERFL PVRFSLIETD GVTRVSIE