| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3590 |
|---|
| Symbol | hofM |
|---|
| ID | 5594877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3566329 |
|---|
| End bp | 3567108 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640922707 |
|---|
| Product | HofM protein |
|---|
| Protein accession | YP_001460188 |
|---|
| Protein GI | 157162870 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.0186035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTA AGATCTGGCA AATTGGTTTG CATTTACAAC AGCAAGAAGC GTTAGCGGTT
GCGATCGTGC GGGACGCAAA AGAATGCTTT TTGCAACGCT GGTGGCGGTT GCCGTTGGCG
CACGACATTA TCAAAGATGG GCGGATTGTT GATGCGCAGC GGCTGGCTAA AACGTTGTTG
CCGTGGAGTC GCGAACTGCC GCAGCGCCAT CACATCATGT TGGCGTTTCC CGCCAGTCGC
ACATTACAGC GGTCATTTCC GCGCCCGTCG ATGTCCCTCG GTGAGCGGGA GCAAATGGCC
TGGCTGTCTG GGACGATGGC CCGCGAGCTG GATATGGATC CGGACTCCCT GCGCTTCGAT
TACAGCGAAG ACTCACTCAG CCCCGCTTAT AACGTGACTG CCGCGCAAAG CAAAGAGCTG
GCAACGCTAC TTACTCTGGC AGAAAGGTTG CGTGTTCATG TGAGCGCGAT CACCCCGGAT
GCCAGTGCAT TACAGCAATT CCTGCCTTTT TTACCTTCTC ATCAGCAATG TCTGGCCTGG
CGTGATAACG AACAGTGGCT GTGGGCGACG CGCTATAGCT GGGGGCGCAA ACTGGCGGTA
GGGATGACTA GCGCGAAGGA GCTGGCGGCA GCGTTATCCG TTGATCCCGA CAGCGTCGCG
ATATGTGGCG AAGGCGGATT TGATCCCTGG GAGGCCGTTT CTGTTCGTCA GCCGCCGCTA
CCGCCGCCTG GTGGAGACTT TGCCATCGCG CTGGGGCTGG CGCTTGGGAA GGCGTACTGA
|
|---|
| Protein sequence | MAFKIWQIGL HLQQQEALAV AIVRDAKECF LQRWWRLPLA HDIIKDGRIV DAQRLAKTLL
PWSRELPQRH HIMLAFPASR TLQRSFPRPS MSLGEREQMA WLSGTMAREL DMDPDSLRFD
YSEDSLSPAY NVTAAQSKEL ATLLTLAERL RVHVSAITPD ASALQQFLPF LPSHQQCLAW
RDNEQWLWAT RYSWGRKLAV GMTSAKELAA ALSVDPDSVA ICGEGGFDPW EAVSVRQPPL
PPPGGDFAIA LGLALGKAY
|
|---|
| |