Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3584 |
Symbol | damX |
ID | 5595484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3560365 |
End bp | 3561663 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640922701 |
Product | hypothetical protein |
Protein accession | YP_001460182 |
Protein GI | 157162864 |
COG category | [S] Function unknown |
COG ID | [COG3266] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000000527215 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGAAT TCAAACCAGA AGACGAGCTG AAACCCGATC CCAGCGATCG TCGTACTGGT CGTTCTCGTC AATCTTCTGA ACGTTCTAAG CGTACTGAAC GTGGCGAACC GCAGATCAAT TTTGATGATA TTGAACTTGA TGACACTGAC GATCGCCGTC CGACTCGTGC GCAAAAAGAG CGCAATGAGG AACCGGAAAT CGAAGAAGAA ATTGACGAAT CCGAAGATGA AACCGTGGAT GAAGAGCGCG TAGAGCGTCG TCCGCGTAAG CGCAAAAAAG CAGCCAGTAA ACCCGCTTCT CGTCAGTATA TGATGATGGG CGTCGGCATT CTGGTTCTAC TGCTGTTGAT CATCGGTATC GGTTCTGCGC TAAAAGCCCC CTCGACCACT TCCAGCGATC AAACCGCGTC TGGCGAGAAG AGTATTGATC TTGCTGGCAA TGCGACCGAT CAGGCGAATG GCGTGCAGCC AGCGCCGGGA ACCACGTCTG CGGAAAATAC TCAGCAGGAT GTTTCTCTGC CACCGATCTC TTCTACGCCG ACTCAAGGGC AAACCCCGGT CGCAACGGAT GGTCAACAAC GTGTTGAAGT GCAGGGTGAC CTGAACAATG CGCTGACCCA GCCACAAAAT CAGCAACAGT TGAACAATGT GGCGGTCAAT TCTACATTGC CGACTGAACC CGCGACTGTC GCGCCAGTAC GCAATGGCAA TGCATCGCGT GACACGGCGA AAACGCAAAC TGCTGAACGT CCGGCCACTA CGCGTCCAGC TCGTCAGCAG GCGGTGATTG AACCGAAAAA ACCGCAAGCA ACCGTGAAAA CGGAACCGAA GCCGGTAGCA CAGACGCCGA AGCGTACTGA ACCAGCTGCC CCTGTGGCGA GCACGAAGGC ACCGGCTGCG ACTTCTACGC CAGCCGCAAC GCCAGCACCA AAAGAGACGG CGACTACGGC TCCAGTACAG ACGGCATCCC CGGCGCAAAC CACGGCAACA CCAGCCGCTG GAGGGAAGAC CGCAGGTAAT GTTGGTTCGT TGAAATCGGC ACCGTCCAGC CATTACACTC TGCAGCTGAG CAGTTCCTCT AACTACGACA ACCTGAACGG TTGGGCGAAG AAAGAGAATC TGAAAAACTA CGTTGTCTAT GAAACGACGC GTAATGGTCA GCCGTGGTAT GTCCTGGTTT CTGGCGTGTA CGCTTCGAAA GAAGAGGCGA AAAAAGCGGT ATCTACATTG CCAGCAGATG TTCAGGCCAA AAACCCGTGG GCGAAACCGC TGCGTCAGGT ACAGGCCGAT CTGAAGTAA
|
Protein sequence | MDEFKPEDEL KPDPSDRRTG RSRQSSERSK RTERGEPQIN FDDIELDDTD DRRPTRAQKE RNEEPEIEEE IDESEDETVD EERVERRPRK RKKAASKPAS RQYMMMGVGI LVLLLLIIGI GSALKAPSTT SSDQTASGEK SIDLAGNATD QANGVQPAPG TTSAENTQQD VSLPPISSTP TQGQTPVATD GQQRVEVQGD LNNALTQPQN QQQLNNVAVN STLPTEPATV APVRNGNASR DTAKTQTAER PATTRPARQQ AVIEPKKPQA TVKTEPKPVA QTPKRTEPAA PVASTKAPAA TSTPAATPAP KETATTAPVQ TASPAQTTAT PAAGGKTAGN VGSLKSAPSS HYTLQLSSSS NYDNLNGWAK KENLKNYVVY ETTRNGQPWY VLVSGVYASK EEAKKAVSTL PADVQAKNPW AKPLRQVQAD LK
|
| |