Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3526 |
Symbol | gspK1 |
ID | 5593457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3507267 |
End bp | 3508250 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640922643 |
Product | general secretion pathway protein K |
Protein accession | YP_001460124 |
Protein GI | 157162806 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATG AACAACGCGG CGTCGCGCTG CTCATTGTAC TCATGTTACT GGCGCTCATG GCTGCTCTGG CAGCAGACAT GACGCTCAGT TTTCACAGCC AGCTTCAGCG AACCCGCCAG GTAAACCATC ATCTGCAACG GCAATATGAT ATTGAACTGG CGGAGAAACT TGCGCTTGCC AGCCTCACCC AGGACGTTAA AGATAACGAC AGACAGACCA CGTTGCAGCA GTACTGGGCA CAGCCACAAC AGTTGCAGCT GGAAGATGGC AATACAGTGA AGTGGCAGTT ACGCGATGCC CAGCACTGTT TTAATCTCAA TGCGTTAGCA AAAATCTCTG ACGACCCGCT GGCTTCCCCT GATTTCCCCG CCCAGGTATT CAGTGCGCTG CTGATTAACG CCGGTATCGA TCGCGGAAAC ACCGATGAGA TCGTGCAATC AATCGCTGAC TATATTGATG TCGATGACTC ACCACGCTTT CACGGCGCAG AAGATAGCTT TTACCAAAGC CAGACGCCGC CCCGGCATAG TGCCAATCAG ATGCTTTTTC TGACTGGCGA ATTACGTCAG ATAAAAGGCA TAACCGAAAA CATCTATCAG CGGCTTATCC CGTATGTCTG CGTTCTCCCG ACCACGGAAC TTAGCATCAA TCTTAATATG CTAACGGAGA ACGATATTCC GCTCTTCAGA GCGTTATTCC TCAATAACAT CACGGATGCT GACGCTCGGG TCTTATTGCA AAAAAGGCCG AGGGAAGGCT GGCTAACCAC GGATGCATTT CTTTACTGGG CGCAGCAGGA TTTCTCCGGT GTGAAGCCAC TGGTTGCTCA GGTGAAAAGG CATCTCTTTC CCTATAGCCG CTATTTTACG CTGAGTACGG AAAGTATCAG CGACGAACAA TCCCAGGGAT GGCAAAGCCA TATTTTTTTC AACCGTAAAC AGCAGAGCGC CCAAATCTAT CGGCGTACGC TGCAACTCTA CTAA
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Protein sequence | MNNEQRGVAL LIVLMLLALM AALAADMTLS FHSQLQRTRQ VNHHLQRQYD IELAEKLALA SLTQDVKDND RQTTLQQYWA QPQQLQLEDG NTVKWQLRDA QHCFNLNALA KISDDPLASP DFPAQVFSAL LINAGIDRGN TDEIVQSIAD YIDVDDSPRF HGAEDSFYQS QTPPRHSANQ MLFLTGELRQ IKGITENIYQ RLIPYVCVLP TTELSINLNM LTENDIPLFR ALFLNNITDA DARVLLQKRP REGWLTTDAF LYWAQQDFSG VKPLVAQVKR HLFPYSRYFT LSTESISDEQ SQGWQSHIFF NRKQQSAQIY RRTLQLY
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