Gene EcHS_A3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3525 
SymbolgspJ1 
ID5593456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3506687 
End bp3507274 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content50% 
IMG OID640922642 
Productgeneral secretion pathway protein J 
Protein accessionYP_001460123 
Protein GI157162805 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATC GCCAGCAGGG TTTCACATTG CTGGAGGTCA TGGCGGCGCT GGCGATTTTC 
TCAATGCTTA GCGTGCTGGC GTTTATGATT TTTTCGCAAG CTTCCGAGTT GCATCAACGC
TCACAGAAAG AAATCCAGCA GTTCAATCAG CTACAGCGCA CCATCACCAT TCTTGATAAC
GATCTCCTGC AACTGGTCGC CCGGAGGAAT CGGAGTACGG ACAAAATCAT GGTGTTGGGT
GAAGAAGCTA TTTTTACCAC GCAAAGTCGC GATCCGCTGG CTCCTCTCAG TGAAGCACAA
ACCTTACTCA CTGTTCACTG GTATCTGCGA AATCATACGC TCTACCGTGC TGTTCGTACT
TCTGTGGATA GCAGGAAGGA TCAACCCGCC CAGGCGATGC TGGAACATGT CGAGAGCTTT
CTTCTGGAAA GTAACAGCGG GGAAAGCCAG GAACTTCCTC TCTCAGTCAC GTTACATCTG
CAGACTCAGC AATATGGGGG GTTACAGCGC CGTTTTGCAT TACCTGAGCA GTTAGCGAGA
GAAGAGTCGC CAGCTCAGAC GCAGGCCGGG AATAATAACC ATGAATAA
 
Protein sequence
MINRQQGFTL LEVMAALAIF SMLSVLAFMI FSQASELHQR SQKEIQQFNQ LQRTITILDN 
DLLQLVARRN RSTDKIMVLG EEAIFTTQSR DPLAPLSEAQ TLLTVHWYLR NHTLYRAVRT
SVDSRKDQPA QAMLEHVESF LLESNSGESQ ELPLSVTLHL QTQQYGGLQR RFALPEQLAR
EESPAQTQAG NNNHE