| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3525 |
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| Symbol | gspJ1 |
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| ID | 5593456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3506687 |
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| End bp | 3507274 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640922642 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001460123 |
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| Protein GI | 157162805 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAATC GCCAGCAGGG TTTCACATTG CTGGAGGTCA TGGCGGCGCT GGCGATTTTC
TCAATGCTTA GCGTGCTGGC GTTTATGATT TTTTCGCAAG CTTCCGAGTT GCATCAACGC
TCACAGAAAG AAATCCAGCA GTTCAATCAG CTACAGCGCA CCATCACCAT TCTTGATAAC
GATCTCCTGC AACTGGTCGC CCGGAGGAAT CGGAGTACGG ACAAAATCAT GGTGTTGGGT
GAAGAAGCTA TTTTTACCAC GCAAAGTCGC GATCCGCTGG CTCCTCTCAG TGAAGCACAA
ACCTTACTCA CTGTTCACTG GTATCTGCGA AATCATACGC TCTACCGTGC TGTTCGTACT
TCTGTGGATA GCAGGAAGGA TCAACCCGCC CAGGCGATGC TGGAACATGT CGAGAGCTTT
CTTCTGGAAA GTAACAGCGG GGAAAGCCAG GAACTTCCTC TCTCAGTCAC GTTACATCTG
CAGACTCAGC AATATGGGGG GTTACAGCGC CGTTTTGCAT TACCTGAGCA GTTAGCGAGA
GAAGAGTCGC CAGCTCAGAC GCAGGCCGGG AATAATAACC ATGAATAA
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| Protein sequence | MINRQQGFTL LEVMAALAIF SMLSVLAFMI FSQASELHQR SQKEIQQFNQ LQRTITILDN
DLLQLVARRN RSTDKIMVLG EEAIFTTQSR DPLAPLSEAQ TLLTVHWYLR NHTLYRAVRT
SVDSRKDQPA QAMLEHVESF LLESNSGESQ ELPLSVTLHL QTQQYGGLQR RFALPEQLAR
EESPAQTQAG NNNHE
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