| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3523 |
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| Symbol | gspH1 |
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| ID | 5593612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3505811 |
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| End bp | 3506320 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640922640 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001460121 |
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| Protein GI | 157162803 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC AACGCGGGTT TACCCTGCTG GAGATGATGC TGGTGCTGGC GCTGGTCGCT
ATCACGGCAA GCGTGGTGCT CTTCACATAT GGCCGGGAGG ATGTCGCCAA CACTCGTGCG
CGCGAAACAG CGGCGCGGTT TACCGCTGCA CTTGAATTAG CCATCGACCG CGCCACGCTC
AGTGGTCAGC CTGTCGGTAT CCATTTCTCT GATTCAGCAT GGCGCATTAT GGTACCGGGC
AAAACACCAT CAGCCTGGCG CTGGGTTCCA TTACAAGAAG ATGCCGCAGA CGAGAGCCAA
AATGACTGGG ATGAAGAACT CTCAATTCAT CTTCAGCCAT TTAAACCTGA TGACAGCAAC
CAGCCACAGG TTGTGATTCT GGCCGACGGA CAAATCACGC CCTTCTCTTT GTTGATGGCT
AACGCCGGGA CCGGTGAGCC GCTCCTGACG TTAGTCTGTT CAGGCTCATG GCCCCTGGAT
CAAACGCTCG CCAGAGATAC CCGCCCATGA
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| Protein sequence | MNQQRGFTLL EMMLVLALVA ITASVVLFTY GREDVANTRA RETAARFTAA LELAIDRATL
SGQPVGIHFS DSAWRIMVPG KTPSAWRWVP LQEDAADESQ NDWDEELSIH LQPFKPDDSN
QPQVVILADG QITPFSLLMA NAGTGEPLLT LVCSGSWPLD QTLARDTRP
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