Gene EcHS_A3522 details

Gene Information

• Locus tag: EcHS_A3522
• Symbol: gspG1
• ID: 5593611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3505366
• End bp: 3505803
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640922639
• Product: general secretion pathway protein G
• Protein accession: YP_001460120
• Protein GI: 157162802
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 0.619829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGCAA CGGATAAGCA ACGCGGTTTT ACATTACTGG AAATTATGGT GGTGATCGTC 
ATTATCGGCG TACTTGCCAG CCTGGTGGTT CCTAACCTAA TGGGCAATAA AGAAAAGGCG 
GATAAGCAAA AAGCCGTCAG CGATATTGTG GCGCTGGAAA ACGCCCTTGA TATGTACAAA 
CTCGACAATC ATCACTATCC AACCACAAAT CAGGGGCTTG AATCCTTAGT AGAAGCGCCG 
ACACTGCCAC CGCTGGCCGC AAACTATAAC AAGGAAGGTT ATATCAAGCG TCTGCCTGCC 
GATCCCTGGG GCAATGATTA TGTCCTCGTT AATCCTGGTG AACATGGTGC ATACGATCTG 
CTTTCAGCAG GGCCCGATGG TGAAATGGGA ACCGAGGACG ACATCACCAA CTGGGGTTTG 
AGCAAGAAGA AAAAGTAA 

 

Protein sequence

MRATDKQRGF TLLEIMVVIV IIGVLASLVV PNLMGNKEKA DKQKAVSDIV ALENALDMYK 
LDNHHYPTTN QGLESLVEAP TLPPLAANYN KEGYIKRLPA DPWGNDYVLV NPGEHGAYDL 
LSAGPDGEMG TEDDITNWGL SKKKK