| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3518 |
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| Symbol | gspC2 |
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| ID | 5593285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3499921 |
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| End bp | 3500736 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640922635 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_001460116 |
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| Protein GI | 157162798 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.000156607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCACAC TACGTTTCCC CTTCCATCTG GCGAATCATA ATAAAGATGC TGCCATCAAT
ATATTGATTA TATTTATAAG CATAGGGTCT ATTATTTTTA ATGTGAATTA TTTCCATACA
ACTATAGTTA AAAATGGACA GATCATTAAT CAACCAACAA ACGCATTTCA GTCTGATTTC
AGCCTTGCCG CTTTATGGCG TAACGAAAAT CATGCTGGGG TAAAAGATGC AAATCCCGTG
GCAGTTAATC AGGAAACACC TAAGCTCTCT ATAGCGCTTA ATGGCATTGT ACTCACATCG
AATGATGAGA CTTCTTTTGT CTTAATTAAT GAGGGGAGCG AACAAAAGCG ATACTCCCTC
AACGAAGCCC TTGAGTCAGC GCCGGGAACG TTTATTAGAA AAATAAATAA AACCAGCGTT
GTGTTTGAAA CTCACGGGCA TTACGAAAAA GTAACTCTCC ATCCAGGGCT ACCTGACATC
ATCAAGCAGC CTGATTCAGA AAGTCAAAAT GTACTCGCTG ATTATATTAT CGCCACGCCT
ATACGTGATG GAGAACAGAT ATACGGGCTT CGATTGAACC CTCGTAAGGG CCTCAATGCA
TTTACCACCA GCTTGCTACA ACCAGGGGAT ATCGCCCTCA GGATCAATAA TCTTTCGCTG
ACCCACCCTG ATGAGGTTTC ACAGGCATTA AGTTTACTGC TAACTCAACA AAGTGCTCAG
TTTACAATTC GTCGCAACGG CGTACCCCGC TTGATAAATG TTTCCGTCGG GGAACTTACA
GGAATGAATG GACTGCGTCA TGAAAGGACT CAATAA
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| Protein sequence | MPTLRFPFHL ANHNKDAAIN ILIIFISIGS IIFNVNYFHT TIVKNGQIIN QPTNAFQSDF
SLAALWRNEN HAGVKDANPV AVNQETPKLS IALNGIVLTS NDETSFVLIN EGSEQKRYSL
NEALESAPGT FIRKINKTSV VFETHGHYEK VTLHPGLPDI IKQPDSESQN VLADYIIATP
IRDGEQIYGL RLNPRKGLNA FTTSLLQPGD IALRINNLSL THPDEVSQAL SLLLTQQSAQ
FTIRRNGVPR LINVSVGELT GMNGLRHERT Q
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