| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3508 |
|---|
| Symbol | rpsC |
|---|
| ID | 5593060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3493525 |
|---|
| End bp | 3494226 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640922625 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_001460106 |
|---|
| Protein GI | 157162788 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000000538349 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC TAATGGTATT CGCCTGGGTA TTGTAAAACC ATGGAACTCT
ACCTGGTTTG CGAACACCAA AGAATTCGCT GACAACCTGG ACAGCGATTT TAAAGTACGT
CAGTACCTGA CTAAGGAACT GGCTAAAGCG TCCGTATCTC GTATCGTTAT CGAGCGTCCG
GCTAAGAGCA TCCGTGTAAC CATTCACACT GCTCGCCCGG GTATTGTTAT CGGTAAAAAA
GGTGAAGACG TAGAAAAACT GCGTAAGGTC GTAGCGGACA TCGCTGGCGT TCCTGCACAG
ATCAACATCG CCGAAGTTCG TAAGCCTGAA CTGGACGCAA AACTGGTTGC TGACAGCATC
ACTTCTCAGC TGGAACGTCG CGTTATGTTC CGTCGTGCTA TGAAGCGTGC TGTACAGAAC
GCAATGCGTC TGGGCGCTAA AGGTATTAAA GTTGAAGTTA GCGGCCGTCT GGGCGGCGCG
GAAATCGCAC GTACCGAATG GTACCGCGAA GGTCGCGTAC CGCTGCACAC TCTGCGTGCT
GACATCGACT ACAACACCTC TGAAGCGCAC ACCACTTACG GTGTAATCGG CGTTAAAGTG
TGGATCTTCA AAGGCGAGAT CCTGGGTGGT ATGGCTGCTG TTGAACAACC GGAAAAACCG
GCTGCTCAGC CTAAAAAGCA GCAGCGTAAA GGCCGTAAAT AA
|
|---|
| Protein sequence | MGQKVHPNGI RLGIVKPWNS TWFANTKEFA DNLDSDFKVR QYLTKELAKA SVSRIVIERP
AKSIRVTIHT ARPGIVIGKK GEDVEKLRKV VADIAGVPAQ INIAEVRKPE LDAKLVADSI
TSQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYNTSEAH TTYGVIGVKV WIFKGEILGG MAAVEQPEKP AAQPKKQQRK GRK
|
|---|
| |