Gene EcHS_A3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3498 
SymbolrplR 
ID5592428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3489587 
End bp3489940 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content54% 
IMG OID640922615 
Product50S ribosomal protein L18 
Protein accessionYP_001460096 
Protein GI157162778 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0000000558703 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA AATCTGCTCG TATCCGTCGT GCGACCCGCG CACGCCGCAA GCTCCAGGAG 
CTGGGCGCAA CTCGCCTGGT GGTACATCGT ACCCCGCGTC ACATTTACGC ACAGGTAATT
GCACCGAACG GTTCTGAAGT TCTGGTAGCT GCTTCTACTG TAGAAAAAGC TATCGCTGAA
CAACTGAAGT ACACCGGTAA CAAAGACGCG GCTGCAGCTG TGGGTAAAGC TGTCGCTGAA
CGCGCTCTGG AAAAAGGCAT CAAAGATGTA TCCTTTGACC GTTCCGGGTT CCAATATCAT
GGTCGTGTCC AGGCACTGGC AGATGCTGCC CGTGAAGCTG GCCTTCAGTT CTAA
 
Protein sequence
MDKKSARIRR ATRARRKLQE LGATRLVVHR TPRHIYAQVI APNGSEVLVA ASTVEKAIAE 
QLKYTGNKDA AAAVGKAVAE RALEKGIKDV SFDRSGFQYH GRVQALADAA REAGLQF