Gene EcHS_A3497 details

Gene Information

• Locus tag: EcHS_A3497
• Symbol: rpsE
• ID: 5592427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3489069
• End bp: 3489572
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640922614
• Product: 30S ribosomal protein S5
• Protein accession: YP_001460095
• Protein GI: 157162777
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.000000313723
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCACA TCGAAAAACA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTAAACCGC 
GTATCTAAAA CCGTTAAAGG TGGTCGTATT TTCTCCTTCA CAGCTCTGAC TGTAGTTGGC 
GATGGTAACG GTCGCGTTGG TTTTGGTTAC GGTAAAGCGC GTGAAGTTCC AGCAGCGATC 
CAGAAAGCGA TGGAAAAAGC CCGTCGCAAT ATGATTAACG TCGCGCTGAA TAACGGCACT 
CTGCAACACC CTGTTAAAGG TGTTCACACG GGTTCTCGCG TATTCATGCA GCCGGCTTCC 
GAAGGTACCG GTATCATCGC CGGTGGTGCA ATGCGCGCCG TTCTGGAAGT CGCTGGGGTT 
CATAACGTTC TGGCTAAAGC CTATGGTTCC ACCAACCCGA TCAACGTGGT TCGTGCAACT 
ATTGATGGCC TGGAAAATAT GAATTCTCCA GAAATGGTCG CTGCCAAGCG TGGTAAATCC 
GTTGAAGAAA TTCTGGGGAA ATAA 

 

Protein sequence

MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI 
QKAMEKARRN MINVALNNGT LQHPVKGVHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV 
HNVLAKAYGS TNPINVVRAT IDGLENMNSP EMVAAKRGKS VEEILGK