| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3463 |
|---|
| Symbol | |
|---|
| ID | 5591313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 3464478 |
|---|
| End bp | 3465659 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640922581 |
|---|
| Product | His/Glu/Gln/Arg/opine ABC transporter permease |
|---|
| Protein accession | YP_001460069 |
|---|
| Protein GI | 157162751 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.236631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCATC GCCGCTCAAC CGTTAAAGGC TCACTCTCCT TTGCCAACCC TACGGTTCGT
GCCTGGTTAT TCCAGATCCT TGCCGTTGTT GCTGTTGTCG GCATTGTTGG TTGGTTATTT
CACAACACTG TAACGAATCT CAATAATCGT GGCATTACTT CAGGTTTTGC CTTTCTGGAT
CGCGGCGCTG GCTTCGGTAT TGTCCAGCAT TTGATCGATT ACCAGCAGGG CGACACCTAC
GGACGCGTTT TTATTGTCGG CTTACTCAAT ACGCTACTGG TTTCTGCATT GTGTATTGTG
TTCGCTTCTG TTTTGGGCTG CTTTATCGGT CTGGCGAGAC TTTCGGATAA CTGGCTGCTA
CGAAAGCTTT CCACAATTTA TATTGAGATC TTCCGTAATA TTCCCCCGCT GCTGCAAATC
TTCTTCTGGT ACTTTGCCGT GTTGCGCAAT TTGCCCGGAC CACGCCAGGC TGTGAGCGCG
TTTGATCTGG CCTTTTTGAG CAATCGTGGG CTTTATATTC CGTCACCGCA GCTGGGAGAC
GGATTTATTG CGTTTATCCT GGCTGTTGTT ATGGCTATAG TCCTTTCTGT TGGGCTATTC
CGCTTTAATA AAACATACCA GATAAAGACC GGACAACTGC GCCGCACCTG GCCGATCGCC
GCAGTGTTGA TCATTGGTTT GCCTTTACTG GCGCAATGGC TTTTTGGCGC AGCACTACAC
TGGGATGTCC CAGCCCTACG AGGCTTTAAC TTCCGCGGCG GGATGGTTTT AATTCCTGAA
CTGGCAGCCT TAACGCTGGC ACTTTCGGTT TATACCTCTG CATTTATCGC CGAGATTATC
CGCGCTGGGA TCCAGGCAGT GCCTTATGGT CAACATGAAG CGGCTCGGTC ACTGGGATTA
CCCAACCCGG TTACGCTACG CCAGGTCATT ATTCCCCAGG CATTGCGGGT GATTATTCCA
CCGTTAACCA GCCAGTATCT CAACATCGTC AAAAACTCCT CTCTTGCCGC CGCTATTGGC
TATCCCGATA TGGTTTCGCT GTTTGCCGGC ACCGTGCTGA ATCAGACGGG GCAAGCCATC
GAGACGATAG CCATGACCAT GTCGGTCTAT CTGATTATCA GCCTGACTAT CTCGCTGCTG
ATGAATATCT ATAACCGCCG CATCGCGATC GTTGAACGCT AA
|
|---|
| Protein sequence | MSHRRSTVKG SLSFANPTVR AWLFQILAVV AVVGIVGWLF HNTVTNLNNR GITSGFAFLD
RGAGFGIVQH LIDYQQGDTY GRVFIVGLLN TLLVSALCIV FASVLGCFIG LARLSDNWLL
RKLSTIYIEI FRNIPPLLQI FFWYFAVLRN LPGPRQAVSA FDLAFLSNRG LYIPSPQLGD
GFIAFILAVV MAIVLSVGLF RFNKTYQIKT GQLRRTWPIA AVLIIGLPLL AQWLFGAALH
WDVPALRGFN FRGGMVLIPE LAALTLALSV YTSAFIAEII RAGIQAVPYG QHEAARSLGL
PNPVTLRQVI IPQALRVIIP PLTSQYLNIV KNSSLAAAIG YPDMVSLFAG TVLNQTGQAI
ETIAMTMSVY LIISLTISLL MNIYNRRIAI VER
|
|---|
| |