| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3430 |
|---|
| Symbol | aaeA |
|---|
| ID | 5593730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3431782 |
|---|
| End bp | 3432714 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640922549 |
|---|
| Product | p-hydroxybenzoic acid efflux subunit AaeA |
|---|
| Protein accession | YP_001460037 |
|---|
| Protein GI | 157162719 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACAC TAATAAGAAA ATTCTCCCGT ACGGCCATCA CGGTCGTATT AGTCATTCTG
GCCTTCATCG CAATTTTTAA TGCCTGGGTC TATTACACCG AATCCCCGTG GACGCGTGAC
GCGCGCTTTA GCGCTGATGT CGTTGCGATC GCGCCGGACG TTTCTGGACT CATTACCCAG
GTGAATGTTC ATGATAACCA GCTGGTGAAA AAAGGACAGG TACTGTTCAC CATCGACCAG
CCGCGCTATC AAAAGGCGCT TGAGGAAGCG CAAGCCGATG TTGCTTATTA TCAGGTACTG
GCACAGGAGA AACGCCAGGA GGCCGGACGT CGTAATCGTC TCGGTGTGCA GGCGATGTCT
CGCGAAGAGA TCGACCAGGC CAACAACGTA CTACAAACGG TTCTGCATCA GTTAGCGAAA
GCGCAGGCGA CCCGCGATCT GGCAAAACTG GATCTTGAAC GCACGGTGAT CCGCGCGCCA
GTGGATGGCT GGGTGACCAA CCTCAACGTC TATACCGGTG AGTTTATTAC TCGTGGATCA
ACGGCGGTTG CGCTGGTGAA ACAGAACTCT TTCTATGTAC TGGCCTATAT GGAAGAAACT
AAGCTGGAAG GGGTGCGCCC TGGGTATCGT GCAGAGATCA CGCCGCTTGG CAGTAACAAA
GTGCTGAAAG GGACTGTTGA TAGTGTTGCC GCTGGGGTCA CCAACGCCAG CAGCACGCGT
GACGACAAAG GGATGGCGAC CATCGACTCT AACCTTGAAT GGGTGCGTTT GGCGCAACGT
GTTCCGGTTC GTATTCGTCT CGACAACCAG CAAGAGAACA TCTGGCCTGC GGGCACCACT
GCTACAGTGG TGGTCACTGG CAAACAAGAT CGCGACGAAA GCCAGGATTC GTTCTTCCGT
AAAATGGCCC ATCGCCTGCG TGAGTTTGGT TAA
|
|---|
| Protein sequence | MKTLIRKFSR TAITVVLVIL AFIAIFNAWV YYTESPWTRD ARFSADVVAI APDVSGLITQ
VNVHDNQLVK KGQVLFTIDQ PRYQKALEEA QADVAYYQVL AQEKRQEAGR RNRLGVQAMS
REEIDQANNV LQTVLHQLAK AQATRDLAKL DLERTVIRAP VDGWVTNLNV YTGEFITRGS
TAVALVKQNS FYVLAYMEET KLEGVRPGYR AEITPLGSNK VLKGTVDSVA AGVTNASSTR
DDKGMATIDS NLEWVRLAQR VPVRIRLDNQ QENIWPAGTT ATVVVTGKQD RDESQDSFFR
KMAHRLREFG
|
|---|
| |