Gene EcHS_A3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3409 
Symbol 
ID5593365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3412604 
End bp3413068 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID640922530 
Producthypothetical protein 
Protein accessionYP_001460018 
Protein GI157162700 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGG GTGAAGTACA GTCATTACCG TCTGCTGGGT TACATCCTGC GTTACAGGAC 
GCGTTAACGC TGGCCTTAGC TGCCAGACCG CAAGAAAAAG CGCCGGGTCG TTACGAATTA
CAGGGCGACA ATATTTTTAT GAATGTCATG ACGTTTAACA CTCAATCGCC CGTCGAGAAA
AAAGCGGAAT TGCACGAGCA ATACATTGAT ATCCAGCTGT TATTAAACGG TGAGGAACGG
ATTCTGTTTG GCATGGCAGG CACTGCGCGC CAATGTGAAG AGTTCCACCA TGAAGATGAT
TACCAGCTTT GCAGCGCCAT TGAAAACGAG CAAACCATCA ACTTAAAACC GGGAATGTTC
GCCGTGTTTA TGCCGGGAGA ACCGCATAAA CCAGGATGCG TTGTCGGCGA GCCGGGTGAG
ATTAAAAAGG TGGTGGTGAA GGTTAAGGCT GATTTAATGG CTTAA
 
Protein sequence
MMMGEVQSLP SAGLHPALQD ALTLALAARP QEKAPGRYEL QGDNIFMNVM TFNTQSPVEK 
KAELHEQYID IQLLLNGEER ILFGMAGTAR QCEEFHHEDD YQLCSAIENE QTINLKPGMF
AVFMPGEPHK PGCVVGEPGE IKKVVVKVKA DLMA