Gene EcHS_A3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3396 
SymbolyfiA 
ID5592930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3397100 
End bp3397387 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content45% 
IMG OID640922516 
Productputative sigma(54) modulation protein 
Protein accessionYP_001460005 
Protein GI157162687 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCA ACATTACCGG AAATAACGTC GAGATCACCG AGGCACTGCG CGAATTTGTT 
ACAGCCAAAT TTGCCAAACT TGAGCAATAT TTTGACCGAA TCAACCAGGT CTATGTTGTT
CTGAAAGTGG AGAAAGTCAC CCACACCTCA GATGCAACAC TGCATGTAAA CGGTGGTGAA
ATTCATGCCA GCGCGGAAGG TCAGGACATG TACGCTGCCA TTGATGGCTT AATTGATAAG
CTGGCACGCC AGTTGACCAA ACATAAAGAT AAACTGAAAC AACACTAA
 
Protein sequence
MQLNITGNNV EITEALREFV TAKFAKLEQY FDRINQVYVV LKVEKVTHTS DATLHVNGGE 
IHASAEGQDM YAAIDGLIDK LARQLTKHKD KLKQH