Gene EcHS_A3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3352 
Symbol 
ID5592806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3354374 
End bp3355381 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content56% 
IMG OID640922470 
Producthypothetical protein 
Protein accessionYP_001459963 
Protein GI157162645 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03558] luciferase family oxidoreductase, group 1 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA AAACCATTGC GTTTTCGCTA CTCGATCTGG CCCCTATCCC CGAAGGTTCT 
TCAGCGCGAG AAGCGTTCTC CCACTCTCTC GATCTCGCCC GTCTGGCTGA AAAGCGCGGC
TATCATCGCT ACTGGCTGGC GGAACACCAC AATATGACCG GCATTGCCAG TGCTGCAACA
TCGGTATTAA TTGGTTATCT GGCAGCGAAT ACCACCACGC TGCATCTGGG GTCCGGTGGC
GTGATGTTGC CTAACCACTC ACCATTGGTC ATTGCCGAAC AGTTCGGCAC GCTTAATACA
CTCTATCCGG GGAGAATCGA TTTGGGGCTG GGCCGCGCGC CGGGTAGCGA TCAGCGAACC
ATGATGGCAC TGCGTCGTCA TATGAGTGGC GATATTGATA ATTTCCCCCG CGATGTCGCG
GAGCTGGTGG ACTGGTTTGA CGCCCGCGAT CCCAATCCGC ATGTGCGCCC GGTACCAGGC
TATGGCGAGA AAATCCCCGT GTGGTTGCTA GGCTCCAGCC TTTACAGCGC GCAACTGGCG
GCGCAGCTTG GTCTGCCGTT TGCGTTTGCC TCACACTTCG CGCCGGATAT GTTGTTCCAG
GCGCTGCATC TTTATCGCAG CAACTTCAAA CCGTCGGCAC GACTGGAAAA ACCATACGCG
ATGGTGTGCA TCAATATTAT CGCCGCCGAC AGCAACCGCG ACGCTGAATT TCTGTTTACC
TCGATGCAGC AAGCTTTTGT GAAGCTGCGC CGCGGCGAAA CCGGGCAACT ACCGCCACCG
ATTCAGAATA TGGATCAGTT CTGGTCACCG TCTGAGCAGT ATGGCGTGCA ACAGGCGCTG
AGTATGTCGC TGGTGGGCGA TAAAGCGAAA GTGCGTCATG GCTTGCAGTC GATCCTGCGC
GAAACCGACG CCGATGAGAT TATGGTTAAC GGGCAGATTT TCGATCACCA GGCGCGCCTG
CATTCGTTTG AACTGGCGAT GGACGTGAAG GAAGAGTTGT TGGGATAG
 
Protein sequence
MTDKTIAFSL LDLAPIPEGS SAREAFSHSL DLARLAEKRG YHRYWLAEHH NMTGIASAAT 
SVLIGYLAAN TTTLHLGSGG VMLPNHSPLV IAEQFGTLNT LYPGRIDLGL GRAPGSDQRT
MMALRRHMSG DIDNFPRDVA ELVDWFDARD PNPHVRPVPG YGEKIPVWLL GSSLYSAQLA
AQLGLPFAFA SHFAPDMLFQ ALHLYRSNFK PSARLEKPYA MVCINIIAAD SNRDAEFLFT
SMQQAFVKLR RGETGQLPPP IQNMDQFWSP SEQYGVQQAL SMSLVGDKAK VRHGLQSILR
ETDADEIMVN GQIFDHQARL HSFELAMDVK EELLG