Gene EcHS_A3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3349 
Symbol 
ID5592163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3351678 
End bp3352202 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content52% 
IMG OID640922467 
Productsterol-binding protein 
Protein accessionYP_001459960 
Protein GI157162642 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGGATA AACTGCGTTC CCGTATTGTG CATTTGGGGC CATCTCTGTT GAGTGTACCG 
GTAAAACTGA CGCCATTTGC GCTAAAACGC CAGGTTCTTG AGCAGGTCTT AAGCTGGCAA
TTCCGTCAGG CGCTGGATGA TGGCGAGCTG GAGTTTCTTG AAGGCCGCTG GTTAAGTATT
CATGTGCGTG ATATTGACCT GCAATGGTTT ACCTCGGTGG TGAATGGCAA ACTGGTGGTC
AGCCAGAACG CGCAAGCTGA TGTGAGTTTT AGTGCCGACG CCAGCGATCT GCTGATGATT
GCGGCGCGTA AACAGGATCC GGATACGCTC TTCTTCCAGC GTCGGCTGGT GATTGAAGGC
GATACGGAGC TGGGGCTGTA TGTGAAAAAC CTGATGGACG CCATTGAACT GGAGCAAATG
CCGAAAGCCT TACGCATGAT GCTGCTGCAA CTGGCGGATT TTGTTGAGGC GGGAATGAAA
ACCGCGCCTG AAACCAAACA GACATCGGTA GGTGAACCAT GCTAA
 
Protein sequence
MLDKLRSRIV HLGPSLLSVP VKLTPFALKR QVLEQVLSWQ FRQALDDGEL EFLEGRWLSI 
HVRDIDLQWF TSVVNGKLVV SQNAQADVSF SADASDLLMI AARKQDPDTL FFQRRLVIEG
DTELGLYVKN LMDAIELEQM PKALRMMLLQ LADFVEAGMK TAPETKQTSV GEPC