Gene EcHS_A3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3344 
Symbol 
ID5591984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3349137 
End bp3349772 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID640922462 
ProductNAD dependent epimerase/dehydratase family protein 
Protein accessionYP_001459955 
Protein GI157162637 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGG TACTGATTAC AGGCGCAACG GGGCTGGTGG GCGGTCACCT GCTGCGGATG 
TTGATTAACG AACCGAAAGT TAACGCCATT GCTGCGCCGA CGCGACGTCC GTTGGGCGAT
ATGCCCGGGG TGTTTAATCC CCATGATCCG CAACTGAGTG ACGCGTTGGC GCAGGTCACC
GATCCCATCG ACATTGTGTT TTGTTGTCTC GGCACCACGC GGCGAGAAGC GGGGAGCAAA
GAGGCGTTTA TTCATGCCGA TTACACGCTG GTAGTGGATA CCGCATTAAC CGGGCGGCGA
CTGGGCGCGC AGCATATGTT GGTAGTCAGT GCGATGGGTG CCAATGCCCA CTCGCCGTTT
TTCTATAACC GCGTCAAAGG GGAGATGGAA GAAGCATTAA TCGCCCAGAA CTGGCCGAAA
TTGACCATTG CTCGCCCGTC GATGTTACTG GGCGATCGTA GCAAACAGCG GATGAACGAA
ACGCTTTTTG CGCCGCTGTT CCGTTTGTTA CCAGGTAACT GGAAATCCAT TGATGCGAGA
GACGTGGCGC GGGTCATGCT GGCAGAGTCG ATGCGGCCTG AGCATGAAGG CGTGACGATT
TTAAGCTCTT CAGAATTACG CAAAAGAGCT GAATAA
 
Protein sequence
MSQVLITGAT GLVGGHLLRM LINEPKVNAI AAPTRRPLGD MPGVFNPHDP QLSDALAQVT 
DPIDIVFCCL GTTRREAGSK EAFIHADYTL VVDTALTGRR LGAQHMLVVS AMGANAHSPF
FYNRVKGEME EALIAQNWPK LTIARPSMLL GDRSKQRMNE TLFAPLFRLL PGNWKSIDAR
DVARVMLAES MRPEHEGVTI LSSSELRKRA E