Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3334 |
Symbol | |
ID | 5594847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3338351 |
End bp | 3338935 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640922452 |
Product | putative type 1 fimbrial protein |
Protein accession | YP_001459945 |
Protein GI | 157162627 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.370999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG GTACAAAAAT AGCCATTGCG GGCTTACTTG CGCTTTTCGC AGGTAATGCC GCTGCAACAG ATGGTGAAAT AGTTTTTGAT GGCGAGATTT TAAAATCCGC TTGTGAAATC AATGACTCTG ATAAGAAAAT TGAAGTTGCT CTTGGTCACT ATAATGCCGA ACAGTTTCGT TCTGTTGGCG ATCGTAGCCC AAAAATTCCA TTCACTATTC CTTTAGTTAA CTGCCCAATG ACTGGGTGGG AGCACGATAA CGGCAACGTT GAAGCGTCTT TCCGTCTATG GCTAGAAACG CGGGATAATG GTACCGTTCC TAACTTCCCT AATCTGGCAA AAGTAGGCTC TTTTGCTGGC ATAGCGGCAA CAGGTGTGGG TATCCGTATT GACGATGCGG AAAGCGGAAA CATTATGCCA CTGAATGCTA TGGGCAATGA TAACACGGTT TATCAGATCC CGGCGGACTC CAATGGTATT GTCAATGTTG ACCTCATCGC TTACTACGTA TCAACCGTTG AAGCATCAGA AATCACCCCA GGGGAAGCAG ACGCTGTCGT TAACGTAACG CTGGATTACC GTTAA
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Protein sequence | MNKGTKIAIA GLLALFAGNA AATDGEIVFD GEILKSACEI NDSDKKIEVA LGHYNAEQFR SVGDRSPKIP FTIPLVNCPM TGWEHDNGNV EASFRLWLET RDNGTVPNFP NLAKVGSFAG IAATGVGIRI DDAESGNIMP LNAMGNDNTV YQIPADSNGI VNVDLIAYYV STVEASEITP GEADAVVNVT LDYR
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