| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3332 |
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| Symbol | agaD |
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| ID | 5593959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3336403 |
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| End bp | 3337194 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640922450 |
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| Product | PTS system N-acetylgalactosamine-specific transporter subunit IID |
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| Protein accession | YP_001459943 |
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| Protein GI | 157162625 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 0.40145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCTG AAATCAGTAA AAAAGATATC ACCCGTCTGG GCTTTCGTTC GTCGCTGCTG
CAAGCGAGCT TTAACTACGA AAGGATGCAG GCGGGCGGTT TTACTTGGGC GATGTTGCCG
ATCCTGAAAA AGATTTATAA GGACGACAAA CCGGGCTTAA GCGCGGCGAT GAAAGATAAC
CTCGAATTTA TTAATACCCA CCCGAATCTG GTCGGATTCC TGATGGGGTT ATTAATTTCG
ATGGAAGAAA AAGGAGAAAA CCGCGACACC ATTAAAGGCC TCAAAGTGGC ACTGTTTGGC
CCAATCGCCG GGATTGGCGA TGCGATTTTC TGGTTTACTT TGTTGCCGAT TATGGCGGGA
ATTTGCTCAT CATTTGCCAG CCAGGGAAAC CTGCTGGGGC CGATTCTATT TTTCGCCGTT
TACCTGCTTA TCTTTTTCCT GCGCGTCGGC TGGACCCACG TCGGTTATTC AGTCGGCGTG
AAGGCGATCG ATAAAGTGCG AGAGAACTCG CAGATGATTG CCCGTTCGGC AACCATCCTC
GGGATCACGG TAATCGGCGG GCTGATCGCT TCGTATGTGC ATATTAACGT GGTGACATCG
TTTGCCATCG ACAGTACCCA CAGCGTCGCG CTGCAGCAGG ATTTCTTCGA TAAAGTCTTC
CCGAACATTT TACCGATGGC CTACACCCTG CTGATGTATT ACTTCCTGCG GGTGAAAAAA
GCGCATCCGG TGCTGTTAAT CGGCGTGACT TTTGTGCTCT CTATTGTTTG TTCCGCATTC
GGCATTTTGT AA
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| Protein sequence | MGSEISKKDI TRLGFRSSLL QASFNYERMQ AGGFTWAMLP ILKKIYKDDK PGLSAAMKDN
LEFINTHPNL VGFLMGLLIS MEEKGENRDT IKGLKVALFG PIAGIGDAIF WFTLLPIMAG
ICSSFASQGN LLGPILFFAV YLLIFFLRVG WTHVGYSVGV KAIDKVRENS QMIARSATIL
GITVIGGLIA SYVHINVVTS FAIDSTHSVA LQQDFFDKVF PNILPMAYTL LMYYFLRVKK
AHPVLLIGVT FVLSIVCSAF GIL
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