Gene EcHS_A3326 details

Gene Information

• Locus tag: EcHS_A3326
• Symbol: agaF
• ID: 5592781
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3330986
• End bp: 3331420
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640922444
• Product: PTS system, mannose/sorbose-specific, IIA component
• Protein accession: YP_001459937
• Protein GI: 157162619
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
• TIGRFAM ID: [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component

Plasmid Coverage information

• Num covering plasmid clones: 60
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAGTA TTATTTTGAC AGGGCATGGC GGGTTTGCCA GCGGCATGGA AAAAGCAATG 
AAGCAAATTC TCGGTGAGCA ATCGCAGTTT ATCGCCATCG ATTTTCCGGA AACCTCAAGC 
ACCGCGCTGC TTACATCGCA GCTTGAAGAG GCCATCGCCC AACTGGATTG TGAAGACGGC 
ATTGTTTTTC TGACGGATTT GCTGGGCGGC ACGCCGTTTC GCGTAGCTTC AACGCTGGCG 
ATGCAAAAAC CGGGCTGTGA AGTGATCACC GGCACCAATT TGCAACTGCT ACTGGAGATG 
GTGCTGGAGC GCGAAGGGTT AAGCGGTGAA GAATTCCGTG TACAGGCACT GGAGTGTGGA 
CATCGTGGGC TGACCAGTCT GGTGGACGAG TTAGGCCGCT GCCATGAAGA ATGTCCGGTC 
GAGGAAGGGA TATGA 

 

Protein sequence

MLSIILTGHG GFASGMEKAM KQILGEQSQF IAIDFPETSS TALLTSQLEE AIAQLDCEDG 
IVFLTDLLGG TPFRVASTLA MQKPGCEVIT GTNLQLLLEM VLEREGLSGE EFRVQALECG 
HRGLTSLVDE LGRCHEECPV EEGI