Gene EcHS_A3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3314 
SymbolgarR 
ID5592359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3320487 
End bp3321371 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content53% 
IMG OID640922432 
Producttartronate semialdehyde reductase 
Protein accessionYP_001459925 
Protein GI157162607 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG GTTTTATTGG CCTGGGGATT ATGGGTAAAC CAATGAGTAA AAACCTTCTG 
AAAGCAGGTT ACTCGCTGGT GGTTGCTGAC CGTAACCCAG AAGCTATTGC TGACGTGATT
GCTGCAGGTG CAGAAACAGC GTCTACGGCT AAAGCGATCG CTGAACAGTG CGACGTCATC
ATAACCATGC TGCCAAACTC CCCTCATGTG AAAGAGGTGG CGCTGGGTGA GAATGGCATT
ATTGAAGGCG CGAAGCCAGG TACGGTATTG ATCGATATGA GTTCTATCGC ACCGCTGGCA
AGCCGTGAAA TCAGCGAAGC GCTGAAAGCG AAAGGCATTG ATATGCTGGA TGCTCCGGTG
AGCGGCGGTG AACCGAAAGC CATCGACGGT ACGCTGTCAG TGATGGTGGG CGGCGACAAG
GCTATTTTCG ACAAATACTA TGATTTGATG AAAGCGATGG CGGGTTCCGT GGTGCATACC
GGGGAAATCG GTGCAGGTAA CGTCACCAAA CTGGCAAATC AGGTCATTGT GGCGCTGAAT
ATTGCCGCGA TGTCAGAAGC GTTAACGCTG GCAACTAAAG CGGGCGTTAA CCCGGACCTG
GTTTATCAGG CAATTCGCGG TGGACTGGCG GGCAGTACCG TGCTGGATGC CAAAGCGCCG
ATGGTGATGG ACCGCAACTT CAAGCCGGGC TTCCGTATTG ATCTGCATAT TAAGGATCTG
GCGAATGCGC TGGATACTTC TCACGGCGTC GGCGCACAAC TGCCGCTCAC AGCTGCGGTT
ATGGAGATGA TGCAGGCACT GCGAGCAGAT GGTTTAGGAA CGGCGGATCA TAGCGCCCTG
GCGTGCTACT ACGAAAAACT GGCGAAAGTC GAAGTTACTC GTTAA
 
Protein sequence
MKVGFIGLGI MGKPMSKNLL KAGYSLVVAD RNPEAIADVI AAGAETASTA KAIAEQCDVI 
ITMLPNSPHV KEVALGENGI IEGAKPGTVL IDMSSIAPLA SREISEALKA KGIDMLDAPV
SGGEPKAIDG TLSVMVGGDK AIFDKYYDLM KAMAGSVVHT GEIGAGNVTK LANQVIVALN
IAAMSEALTL ATKAGVNPDL VYQAIRGGLA GSTVLDAKAP MVMDRNFKPG FRIDLHIKDL
ANALDTSHGV GAQLPLTAAV MEMMQALRAD GLGTADHSAL ACYYEKLAKV EVTR