Gene EcHS_A3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3289 
Symbol 
ID5591820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3299475 
End bp3299867 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content49% 
IMG OID640922407 
Productputative inner membrane protein YqjF 
Protein accessionYP_001459901 
Protein GI157162583 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAGAAGATGT TGGTGTACTG GTAGCACGCA TTTTAATGCC GATTCTGTTT 
ATTACCGCTG GCTGGGGAAA AATTACTGGC TACGCGGGTA CCCAACAATA TATGGAAGCA
ATGGGCGTCC CGGGTTTTAT GCTGCCGCTG GTGATTCTGC TTGAGTTCGG TGGTGGTCTG
GCAATCCTGT TCGGTTTCCT GACTCGCACC ACTGCCCTGT TTACTGCGGG CTTTACGCTG
CTGACGGCAT TTTTATTTCA CAGCAACTTT GCTGAAGGCG TCAACTCGCT GATGTTCATG
AAAAACCTGA CAATTTCTGG CGGATTCCTG CTGCTGGCAA TTACCGGTCC GGGCGCGTAT
AGCATCGACC GCCTGCTGAA TAAAAAGTGG TAA
 
Protein sequence
MKKLEDVGVL VARILMPILF ITAGWGKITG YAGTQQYMEA MGVPGFMLPL VILLEFGGGL 
AILFGFLTRT TALFTAGFTL LTAFLFHSNF AEGVNSLMFM KNLTISGGFL LLAITGPGAY
SIDRLLNKKW