Gene EcHS_A3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3282 
Symbol 
ID5595023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp3296686 
End bp3297348 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID640922400 
Productputative inner membrane protein 
Protein accessionYP_001459894 
Protein GI157162576 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.468138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTT TGACCCAATT GCTGCAAGCC CTGTGGGCGC AGGATTTTGA AACCCTGGCC 
AATCCGTCGA TGATTGGCAT GTTGTATTTT GTCTTGTTTG TAATTTTGTT CCTTGAAAAC 
GGCTTGCTTC CGGCGGCCTT TTTACCGGGC GACAGTTTAC TGGTATTGGT CGGCGTGTTG 
ATTGCGAAAG GCGCGATGGG CTATCCGCAA ACGATTCTGC TGCTGACCGT TGCCGCCAGC 
CTCGGCTGCT GGGTCAGCTA TATTCAGGGG CGATGGCTGG GCAATACCCG CACCGTACAA 
AACTGGCTAT CTCATTTACC CGCGCATTAT CATCAACGCG CACACCATCT TTTTCATAAA 
CACGGTTTAT CGGCGCTGTT AATTGGTCGC TTTATTGCGT TTGTCAGAAC ACTGCTGCCG 
ACGATTGCCG GGTTATCAGG GCTGAATAAC GCGCGCTTTC AGTTTTTCAA CTGGATGAGC 
GGTCTGCTGT GGGTATTGAT CCTGACAACT CTGGGTTACA TGCTCGGCAA AACGCCGGTA 
TTTTTAAAGT ACGAGGACCA GCTGATGTCA TGCCTGATGC TGCTCCCGGT GGTGCTGCTG 
GTGTTTGGCC TGGCAGGTTC TCTGGTCGTG TTATGGAAAA AGAAATATGG AAATCGGGGG 
TAA
 
Protein sequence
MELLTQLLQA LWAQDFETLA NPSMIGMLYF VLFVILFLEN GLLPAAFLPG DSLLVLVGVL 
IAKGAMGYPQ TILLLTVAAS LGCWVSYIQG RWLGNTRTVQ NWLSHLPAHY HQRAHHLFHK 
HGLSALLIGR FIAFVRTLLP TIAGLSGLNN ARFQFFNWMS GLLWVLILTT LGYMLGKTPV 
FLKYEDQLMS CLMLLPVVLL VFGLAGSLVV LWKKKYGNRG