| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3278 |
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| Symbol | |
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| ID | 5592096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3291248 |
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| End bp | 3293950 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640922396 |
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| Product | hypothetical protein |
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| Protein accession | YP_001459890 |
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| Protein GI | 157162572 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.887347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA GGATTGCCAT GGATAAAAAA TTACTGGCTC TTTTGATCCT GGCGAGTCTC
AGCCCGGCAG AGGCGGCATT AACCAAAATC CCCGCAGGGT TTGAGGTTAT TGCTCAGGGA
CAGCAGGAGT ATATCGAGGT TTATTTTTCA GGGAAAAATC TCGGTAAATA TTATGCAATG
GTTAATCTTG ATACCGTAAC ATTTCTTGAT CCAGCAAGTT TATATAACAA GCTGGAACTG
GATGTCGACG ATCAGAAAAT CGCGCATATA GTGAAAGAAA AATTATCGCA GCCGCTAGCT
CGCCACGGTG AATTGGCTTG CGGTTATGTA CGTACTGACT CAGGGTGTGG TTTTCTGAAT
ACCGATACGC TGGAAATAAT CTATAATGAT GAAGAAAGTT CGGCAACGTT GTTTATTAAT
CCGCAATGGA ATTCAGCTTT CGATGCGAAG TCATTATATT TAAATCCAGA CAAAAATACG
GTTAACGCTT TTATACATCA GCAAGACATC AATGTTCTGG CACAGGATGA TTACCAATCG
TTGTCTATTC AGGGAAACGG TGCGCTGGGA ATAACAGAAA ATAGCTATAT TGGTGCACAC
TGGAATTTCA ACGGTTATGA TGCAGATGAT GTCAGTGACA GTAATGCTGA TGTCAGCGAT
CTCTATTATC GTTATGATTT TTTACGTCGT TATTATGTGC AGGCGGGGCG CATGGACAAC
CGCACGCTAT TTAATGCACA AGGCGGGAAC TTTACCTTTA ACTTTTTGCC ACTCGGTGCA
ATCGACGGGA TGCGTATCGG GTCGACTCTT AGCTATTTAA ACCAGGCGCA AAGCCAGCAG
GGAACCCCGG TAATGGTCCT GCTTTCGCGC AATTCTCGTG TTGACGCTTA TCGTAATGAG
CAACTTCTGG GATCGTTTTA TCTCAATAGT GGTTCGCAAT TTATTGATAC CAGTTCCTTT
CCCCCGGGTA GCTATAGCGT AGCGTTAAAA GTCTATGAAA ATAACCAACT CACCCGCACC
GAGCTAGTAC CGTTTACCAA AACAGGCGGT CTGACGGACG GAAATGCGCA ATGGTTCTTA
CAGGCAGGTA AAACTACATC ACAGGCTTCT GATGATGAAA GTTCAGCTTA TCAACTGGGG
GTACGCCTGC CATTACATCC GCAATATGAG CTCTACGCAG GGCTGGCGAA TGCCGATAAT
GTGAGTGCTT TCGAGTTAGG TAATGACTGG ACGGCAAATT TAGGCGGGGC AGGGAATCTT
GCAATCAGCG CCAGCGTGTT CCGTAACGAT GACGGCGGCA AAGGTGATAT GCAACAGGCC
AACTGGAGTA ATTCGGGATG GCCGACGTTG GGCTTTTATC GGACCAACTC TGACGGCGAT
GCTTGTGCAA CCGACAGCAG AGAGAGCTAT AACGCCTTAA GCTGTTATGA AAGTATTTCC
GCGACGGTTT CACAGAATTT TGTCGGCTGG AATATGATGC TGGGTTATTC CCGCACACAA
AATAACACTG ATGATAGTTT GCGTTGGGAT AAACAGCAGA GCTTTGAAAA TAACTATCTT
CGCCAGACAA CTGCGCAAAG TATCTCCGAA ACTGTACAAC TTAGCGCTTC CCGCGCTTTT
GTGATGCGTG ACTGGATCTT GAGTACTTCG GTTGGTGTTT TCCATCGTAA TGACAACGGT
GGCGATAACG ACGACAACGG CTTGTACTTA TCGTTTTCGT TATCTGACAC GCCAACGATG
GACAGCAATA ACAACAGCCA TTCAACCAAT GTTTCTACGG ATTATCGTTA TAGCGATCAG
GATGGCGATC AAACGTCATG GCAGTTATCC CATACTTTTT ATAACGATTC ATTCAGCCAT
AAAGAACTTG GCGTAACCGT TGGGGGCCTG AACACCGATA CCATAAACAG CGCGGTTAAC
GGGCGTTGGG ATGGTCAATA CGGAAATGTC TACGCTACCG TATCTGACAG TTATGACCGT
AAGAATCATG ATCATCTCTC GGCCTTTACG GGGACTTACA GCTCTACACT GGCTGTCAGT
CGCTATGGCG TTAATTTGGG TGCCAGTGGT ACAGACGATT TGCTGGGTGC GGTATTGGTG
GATGTGAAAG GCTTCTCTGA ACAGGATGAA GAGAGTCAGG ATCTGCAACT CGAAGCGCGG
GTGGCAGGCA GCCGAACGTT GCAGCTTGGT CAAAGCGACA GTGTGTTGTT CCCTTATCCT
GGATTTCAGT CTGGTTTTGT TGAGGTTAAC GACAGTAGCC AGGGCAATCA ACAAGGGACA
ACAAACATCA TTAACGGTGC GGGGAATCGT GAATTAATGT TGTTGCCTGG CAAACTGCGC
TATCGCGAAG TGTCTGCCAG CTTTAATTAC AACTATATCG GTCGCTTGTT ATTACCAGCA
TCGGTAGAGA AATTCCCGCT GGTTGGTCTG AATAGCGCCA TGTTACTGGT AGCTGAAGAT
GGCGGATTTA CACTTGAAAT TAACGGTAGC GAAAAAGAGC TATATCTGCT TTCCGGGCAG
CAATTCCTTA AGTGTCCGCT GAGTGTTGTA AAGAAACGCG CCAGCATTCG TTACAGCGGA
GATGTCACAT GTAGTGTGGT GACTTATTCA CAATTACCGG AGTCCATTCA GGTTCAGGCA
CAGTTGAAAC AGCCTAAATT ACGTGGAAAC GTTCAGACGG CGCAAAGGGA GGTTGCACCA
TGA
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| Protein sequence | MDFRIAMDKK LLALLILASL SPAEAALTKI PAGFEVIAQG QQEYIEVYFS GKNLGKYYAM
VNLDTVTFLD PASLYNKLEL DVDDQKIAHI VKEKLSQPLA RHGELACGYV RTDSGCGFLN
TDTLEIIYND EESSATLFIN PQWNSAFDAK SLYLNPDKNT VNAFIHQQDI NVLAQDDYQS
LSIQGNGALG ITENSYIGAH WNFNGYDADD VSDSNADVSD LYYRYDFLRR YYVQAGRMDN
RTLFNAQGGN FTFNFLPLGA IDGMRIGSTL SYLNQAQSQQ GTPVMVLLSR NSRVDAYRNE
QLLGSFYLNS GSQFIDTSSF PPGSYSVALK VYENNQLTRT ELVPFTKTGG LTDGNAQWFL
QAGKTTSQAS DDESSAYQLG VRLPLHPQYE LYAGLANADN VSAFELGNDW TANLGGAGNL
AISASVFRND DGGKGDMQQA NWSNSGWPTL GFYRTNSDGD ACATDSRESY NALSCYESIS
ATVSQNFVGW NMMLGYSRTQ NNTDDSLRWD KQQSFENNYL RQTTAQSISE TVQLSASRAF
VMRDWILSTS VGVFHRNDNG GDNDDNGLYL SFSLSDTPTM DSNNNSHSTN VSTDYRYSDQ
DGDQTSWQLS HTFYNDSFSH KELGVTVGGL NTDTINSAVN GRWDGQYGNV YATVSDSYDR
KNHDHLSAFT GTYSSTLAVS RYGVNLGASG TDDLLGAVLV DVKGFSEQDE ESQDLQLEAR
VAGSRTLQLG QSDSVLFPYP GFQSGFVEVN DSSQGNQQGT TNIINGAGNR ELMLLPGKLR
YREVSASFNY NYIGRLLLPA SVEKFPLVGL NSAMLLVAED GGFTLEINGS EKELYLLSGQ
QFLKCPLSVV KKRASIRYSG DVTCSVVTYS QLPESIQVQA QLKQPKLRGN VQTAQREVAP
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