| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3266 |
|---|
| Symbol | |
|---|
| ID | 5592385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3278084 |
|---|
| End bp | 3279220 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640922383 |
|---|
| Product | methyltransferase family protein |
|---|
| Protein accession | YP_001459878 |
|---|
| Protein GI | 157162560 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACT TAGACAACGG TTTCCGTTCA CTGACACTGC AACGTTTTCC GGCGACGGAT
GACGTTAACC CGCTACAGGC GTGGGAAGCG GCGGATGAAT ATTTGCTGCA ACAGTTGGAC
GACACAGAAA TCCGCGGCCC GGTGTTGATC CTGAATGATG CCTTTGGTGC GTTAAGTTGT
GCGCTGGCGG AACATAAGCC GTACAGCATT GGCGACTCAT ACATCAGTGA ACTGGCGACG
CGCGAGAATT TACGCCTAAA CGGGATTGAT GAGTCGAGCG TGAAGTTTCT CGACAGCACC
GCCGACTACC TGCAACAGCC GGGTGTGGTG CTGATCAAAG TGCCGAAAAC ACTGGCATTG
CTGGAACAGC AACTGCGTGC GCTGCGCAAA GTGGTCACGT CGGATACACG TATTATTGCC
GGTGCCAAAG CCCGTGACAT TCACACTTCC ACGCTGGAGC TGTTCGAGAA AGTGCTCGGA
CCGACCACCA CTACGCTGGC ATGGAAAAAA GCGCGCCTGA TTAATTGCAC TTTCAATGAA
CCGCCGCTGG CCGATGCGCC GCAGACCGTT AGCTGGAAGC TGGAAGGTAC TGACTGGACT
ATCCACAACC ATGCGAATGT CTTCTCCCGC ACCGGGCTGG ATATTGGCGC ACGCTTCTTT
ATGCAACATC TGCCAGAGAA TCTCGAAGGT GAGATTGTCG ATCTCGGCTG TGGTAACGGC
GTTATTGGCC TGACGCTGCT TGATAAAAAC CCGCAGGCGA AAGTGGTGTT TGTCGATGAA
TCGCCGATGG CGGTCGCTTC CAGCCGAATG AATGTTGAAA CCAACATGCC AGAGGCGTTG
GATCGCTGCG AGTTTATGAT CAACAACGCG CTCTCCGGAG TGGAGCCTTT CCGCTTTAAT
GCTGTGCTCT GCAACCCGCC GTTTCATCAG CAACATGCGC TGACCGATAA CGTCGCCTGG
GAGATGTTCC ACCACGCCCG CCGCTGCCTG AAAATCAACG GCGAACTGTA TATCGTTGCC
AACCGTCACC TGGATTACTT CCATAAACTG AAGAAGATTT TCGGCAACTG CACCACCATC
GCCACGAATA ATAAATTTGT GGTGCTGAAA ACAGTGAAGC TGGGGCGTCG TCGGTAA
|
|---|
| Protein sequence | MSHLDNGFRS LTLQRFPATD DVNPLQAWEA ADEYLLQQLD DTEIRGPVLI LNDAFGALSC
ALAEHKPYSI GDSYISELAT RENLRLNGID ESSVKFLDST ADYLQQPGVV LIKVPKTLAL
LEQQLRALRK VVTSDTRIIA GAKARDIHTS TLELFEKVLG PTTTTLAWKK ARLINCTFNE
PPLADAPQTV SWKLEGTDWT IHNHANVFSR TGLDIGARFF MQHLPENLEG EIVDLGCGNG
VIGLTLLDKN PQAKVVFVDE SPMAVASSRM NVETNMPEAL DRCEFMINNA LSGVEPFRFN
AVLCNPPFHQ QHALTDNVAW EMFHHARRCL KINGELYIVA NRHLDYFHKL KKIFGNCTTI
ATNNKFVVLK TVKLGRRR
|
|---|
| |