| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3262 |
|---|
| Symbol | |
|---|
| ID | 5592671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 3272332 |
|---|
| End bp | 3274683 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640922379 |
|---|
| Product | putative glycosyl hydrolase |
|---|
| Protein accession | YP_001459874 |
|---|
| Protein GI | 157162556 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA AAACTATTTT AACGCCAGTA ACCTGCGCTC TGCTGATAAG TTTTTCCGCC
CATGCCGCTA ACGCCGACAA TTATAAAAAC GTGATTAACC GTACTGGCGC GCCGCAGTAC
ATGAAGGATT ACGATTACGA CGATCACCAG CGTTTTAATC CGTTTTTCGA TCTCGGAGCC
TGGCATGGTC ATCTGTTGCC AGACGGCCCT AACACCATGG GCGGCTTTCC GGGCGTTGCG
CTGCTGACGG AAGAGTACAT CAACTTTATG GCCAGCAATT TCGACCGCCT GACCGTCTGG
CAGGACGGCA AGAAAGTCGA CTTTACGCTG GAGGCATACA GTATTCCCGG TGCGCTGGTG
CAAAAACTGA CAGCAAAAGA TGTGCAAGTC GAAATGACTC TGCGCTTCGC CACGCCGCGC
ACGTCACTAC TGGAAACCAA AATCACCAGC AATAAACCGC TGGATCTGGT GTGGGACGGC
GAACTGCTGG AAAAACTGGA AGCGAAAGAA GGGAAACCGC TTTCCGATAA AACCATTGCT
GGCGAATACC CTGACTATCA GCGCAAAATC AGCGCCACCC GTGATGGCCT GAAAGTCACC
TTTGGCAAAG TGCGCGCCAC CTGGGATCTG CTGACCTCCG GCGAATCGGA ATATCAGGTG
CATAAATCCC TGCCGGTGCA GACTGAAATC AACGGTAATC GCTTTACCAG TAAGGCGCAT
ATCAACGGTT CGACGACGCT CTATACCACC TATTCCCATC TGCTGACCGC TCAGGAAGTT
AGCAAAGAGC AAATGCAGAT CCGCGATATT CTGGCGCGTC CGGCGTTTTA TCTCACCGCC
TCGCAGCAAC GCTGGGAAGA GTATCTGAAG AAAGGGTTAA CCAATCCGGA TGCGACGCCG
GAACAGACGC GCGTCGCGGT GAAAGCGATC GAAACGCTCA ACGGTAACTG GCGCTCGCCT
GGCGGCGCGG TGAAATACAA CACCGTCACG CCGTCGGTGA CCGGGCGCTG GTTCTCCGGC
AATCAGACCT GGCCGTGGGA TACCTGGAAG CAGGCGTTTG CGATGGCGCA TTTCAATCCG
GACATCGCCA AAGAGAATAT CCGCGCGGTC TTCTCCTGGC AGATCCAGCC CGGCGACAGC
GTGCGTCCGC AGGATGTGGG CTTTGTCCCC GACCTGATAG CGTGGAACCT TAGCCCCGAG
CGTGGTGGCG ATGGCGGCAA CTGGAACGAA CGTAATACCA AACCCAGCCT TGCCGCCTGG
TCGGTGATGG AAGTGTATAA CGTCACCCAG GATAAAACCT GGCTGGCAGA GCTGTACCCG
AAACTGGTGG CCTATCACGA CTGGTGGTTA CGTAACCGCG ATCACAACGG CAACGGCGTG
CCGGAATATG GCGCGACCCG CGACAAAGCC CACAACACTG AGAGCGGCGA GATGCTGTTT
ACGGTGAAAA AAGGCGATAA AGAAGAGACG CAGTCTGGGC TGAACAACTA CGCCCGCGTG
GTGGAGAAAG GCCAGTACGA CAGTCTGGAA ATTCCGGCAC AGGTTGCTGC ATCGTGGGAA
TCGGGCCGTG ATGACGCCGC CGTCTTTGGT TTTATCGACA AAGAACAGTT GGATAAATAT
GTCGCTAATG GCGGCAAACG TAGCGACTGG ACGGTGAAAT TCGCCGAAAA CCGCAGTCAG
GACGGAACGT TGCTGGGCTA CTCGCTATTG CAGGAGTCGG TGGATCAGGC CAGCTATATG
TACAGCGATA ACCATTATCT GGCGGAGATG GCGACCATCC TCGGTAAGCC AGAAGAGGCC
AAACGCTATC GCCAGTTGGC ACAGCAGCTC GCGGACTACA TCAACACCTG TATGTTCGAC
CCGACTACCC AGTTCTACTA TGACGTACGT ATTGAAGATA AACCACTGGC GAACGGCTGC
GCGGGCAAAC CGATTGTTGA GCGCGGTAAA GGGCCGGAAG GCTGGTCGCC GCTGTTTAAC
GGTGCGGCAA CGCAGGCCAA TGCCGACGCG GTGGTGAAGG TGATGCTCGA TCCTAAAGAG
TTCAACACCT TTGTCCCGCT GGGAACGGCG GCGTTAACCA ATCCGGCTTT TGGCGCTGAT
ATCTACTGGC GTGGGCGCGT ATGGGTGGAT CAGTTCTGGT TTGGTCTGAA AGGGATGGAG
CGTTACGGTT ATCGTGATGA TGCCCTGAAG CTGGCGGATA CGTTCTTCCG GCACGCCAAA
GGGTTAACCG CCGATGGACC AATTCAGGAA AATTACAACC CGCTGACAGG CGCACAGCAA
GGCGCACCAA ATTTCTCCTG GAGTGCCGCG CATTTGTATA TGTTGTATAA CGATTTTTTC
CGTAAGCAAT AA
|
|---|
| Protein sequence | MKIKTILTPV TCALLISFSA HAANADNYKN VINRTGAPQY MKDYDYDDHQ RFNPFFDLGA
WHGHLLPDGP NTMGGFPGVA LLTEEYINFM ASNFDRLTVW QDGKKVDFTL EAYSIPGALV
QKLTAKDVQV EMTLRFATPR TSLLETKITS NKPLDLVWDG ELLEKLEAKE GKPLSDKTIA
GEYPDYQRKI SATRDGLKVT FGKVRATWDL LTSGESEYQV HKSLPVQTEI NGNRFTSKAH
INGSTTLYTT YSHLLTAQEV SKEQMQIRDI LARPAFYLTA SQQRWEEYLK KGLTNPDATP
EQTRVAVKAI ETLNGNWRSP GGAVKYNTVT PSVTGRWFSG NQTWPWDTWK QAFAMAHFNP
DIAKENIRAV FSWQIQPGDS VRPQDVGFVP DLIAWNLSPE RGGDGGNWNE RNTKPSLAAW
SVMEVYNVTQ DKTWLAELYP KLVAYHDWWL RNRDHNGNGV PEYGATRDKA HNTESGEMLF
TVKKGDKEET QSGLNNYARV VEKGQYDSLE IPAQVAASWE SGRDDAAVFG FIDKEQLDKY
VANGGKRSDW TVKFAENRSQ DGTLLGYSLL QESVDQASYM YSDNHYLAEM ATILGKPEEA
KRYRQLAQQL ADYINTCMFD PTTQFYYDVR IEDKPLANGC AGKPIVERGK GPEGWSPLFN
GAATQANADA VVKVMLDPKE FNTFVPLGTA ALTNPAFGAD IYWRGRVWVD QFWFGLKGME
RYGYRDDALK LADTFFRHAK GLTADGPIQE NYNPLTGAQQ GAPNFSWSAA HLYMLYNDFF
RKQ
|
|---|
| |