Gene EcHS_A3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3216 
Symbol 
ID5592379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3226450 
End bp3227265 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content54% 
IMG OID640922334 
Producthypothetical protein 
Protein accessionYP_001459832 
Protein GI157162514 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000450029 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTT TAGTTAAGGA TATCATCATG TCTTCAACAC GTATGCCAGC ATTGTTTTTA 
GGTCACGGTA GTCCGATGAA CGTGCTGGAA GATAATTTGT ATACCCGCAG CTGGCAGAAG
TTGGGGATGA CATTGCCACG CCCGCAAGCG ATTGTGGTGG TTTCGGCTCA CTGGTTTACC
CGTGGAACAG GAGTGACCGC GATGGAGACG CCGCCCACGA TTCATGACTT TGGTGGCTTC
CCGCAGGCGC TGTACGATAC GCATTATCCT GCTCCGGGTT CGCCTGCGCT GGCACAGCGT
CTGGTTGAGC TGTTAGCGCC GATCCCGGTG ACGCTGGATA AAGAAGCCTG GGGCTTTGAC
CACGGCTCGT GGGGCGTGCT GATTAAGATG TATCCTGACG CTGATATCCC GATGGTGCAG
TTGAGTATCG ACAGTAGCAA ACCTGCCGCC TGGCATTTCG AAATGGGGCG CAAACTGGCA
GCGCTGCGAG ATGAAGGAAT AATGTTGGTC GCCAGCGGTA ACGTGGTGCA TAACCTGCGC
ACAGTGAAGT GGCACGGTGA TAGTTCACCG TATCCGTGGG CGACGTCGTT TAATGAGTAT
GTGAAAGCGA ATCTGACGTG GCAAGGGCCA GTGGAACAAC ATCCTCTGGT GAATTACCTC
GACCATGAAG GTGGCACGTT ATCGAACCCA ACGCCAGAGC ATTATTTGCC GTTGTTGTAT
GTGTTAGGTG CGTGGGATGG GCAGGAGCCA ATTACCATTC CGGTTGAGGG TATAGAAATG
GGCAGCCTGA GTATGCTGTC GGTGCAGATA GGCTAA
 
Protein sequence
MTPLVKDIIM SSTRMPALFL GHGSPMNVLE DNLYTRSWQK LGMTLPRPQA IVVVSAHWFT 
RGTGVTAMET PPTIHDFGGF PQALYDTHYP APGSPALAQR LVELLAPIPV TLDKEAWGFD
HGSWGVLIKM YPDADIPMVQ LSIDSSKPAA WHFEMGRKLA ALRDEGIMLV ASGNVVHNLR
TVKWHGDSSP YPWATSFNEY VKANLTWQGP VEQHPLVNYL DHEGGTLSNP TPEHYLPLLY
VLGAWDGQEP ITIPVEGIEM GSLSMLSVQI G