Gene EcHS_A3212 details

Gene Information

• Locus tag: EcHS_A3212
• Symbol: nudF
• ID: 5592898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3222112
• End bp: 3222741
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640922330
• Product: ADP-ribose pyrophosphatase NudF
• Protein accession: YP_001459828
• Protein GI: 157162510
• TIGRFAM ID: [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.00741682
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAGC CAGACAGCCT GCCCGTTACA TTTGGCAAAA ACGATGTAGA AATTATTGCA 
CGAGAAACAC TTTATCGCGG CTTTTTTTCA TTAGATCTTT ATAGATTTCG TCATCGTTTA 
TTCAACGGGC AAATGAGTCA TGAGGTACGG CGGGAAATTT TTGAGCGCGG TCACGCCGCA 
GTCTTGCTAC CCTTTGACCC AGTGCGTGAT GAAGTTGTGC TGATTGAGCA GATTCGGATT 
GCCGCATACG ACACCAGTGA AACCCCCTGG CTACTGGAGA TGGTTGCCGG GATGATTGAA 
GAGGGTGAAA GTGTGGAAGA TGTTGCCCGT CGCGAAGCGA TTGAAGAGGC GGGACTGATA 
GTCAAACGGA CCAAACCGGT GTTAAGTTTC TTGGCAAGCC CGGGAGGCAC CAGTGAGCGT 
TCGTCAATTA TGGTGGGCGA AGTGGACGCC ACGACCGCAA GCGGTATTCA TGGTCTGGCT 
GATGAAAACG AAGATATTCG CGTTCATGTG GTAAGCCGGG AACAGGCATA CCAGTGGGTA 
GAAGAGGGGA AAATCGACAA CGCAGCGTCG GTCATCGCTT TGCAATGGCT GCAGCTGCAT 
CATCAAGCGT TAAAAAATGA GTGGGCATAA 

 

Protein sequence

MLKPDSLPVT FGKNDVEIIA RETLYRGFFS LDLYRFRHRL FNGQMSHEVR REIFERGHAA 
VLLPFDPVRD EVVLIEQIRI AAYDTSETPW LLEMVAGMIE EGESVEDVAR REAIEEAGLI 
VKRTKPVLSF LASPGGTSER SSIMVGEVDA TTASGIHGLA DENEDIRVHV VSREQAYQWV 
EEGKIDNAAS VIALQWLQLH HQALKNEWA