| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3196 |
|---|
| Symbol | plsC |
|---|
| ID | 5593237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3207575 |
|---|
| End bp | 3208312 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640922314 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| Protein accession | YP_001459812 |
|---|
| Protein GI | 157162494 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATATA TCTTTCGTCT TATTATTACC GTGATTTACA GCATCTTAGT CTGTGTATTC
GGCTCCATTT ACTGCCTTTT CAGCCCGCGT AACCCGAAAC ATGTGGCCAC CTTTGGGCAT
ATGTTTGGCC GTCTTGCGCC GCTGTTTGGC CTGAAAGTTG AGTGCCGTAA ACCTACAGAC
GCTGAAAGCT ACGGCAATGC TATCTATATC GCTAACCACC AGAACAACTA TGACATGGTG
ACAGCATCGA ACATCGTGCA ACCGCCGACG GTGACGGTAG GTAAAAAGAG CTTGCTGTGG
ATCCCCTTCT TCGGGCAGTT GTACTGGTTA ACCGGCAACT TATTGATCGA CAGAAACAAT
CGCACTAAAG CTCACGGCAC CATTGCGGAA GTAGTGAATC ACTTCAAAAA ACGCCGTATT
TCCATCTGGA TGTTCCCGGA AGGAACCCGC AGCCGTGGTC GCGGCCTGCT ACCGTTCAAG
ACTGGAGCAT TTCACGCGGC AATTGCGGCG GGCGTCCCGA TTATTCCCGT GTGCGTCTCT
ACAACTTCGA ATAAGATTAA TCTTAATCGA CTGCACAACG GTCTGGTGAT TGTCGAAATG
CTGCCGCCAA TTGACGTCAG TCAGTATGGC AAAGATCAGG TTCGTGAGCT GGCTGCCCAT
TGTCGTTCGA TAATGGAACA AAAAATCGCC GAGCTCGATA AAGAAGTCGC AGAACGCGAA
GCCGCCGGAA AAGTTTAA
|
|---|
| Protein sequence | MLYIFRLIIT VIYSILVCVF GSIYCLFSPR NPKHVATFGH MFGRLAPLFG LKVECRKPTD
AESYGNAIYI ANHQNNYDMV TASNIVQPPT VTVGKKSLLW IPFFGQLYWL TGNLLIDRNN
RTKAHGTIAE VVNHFKKRRI SIWMFPEGTR SRGRGLLPFK TGAFHAAIAA GVPIIPVCVS
TTSNKINLNR LHNGLVIVEM LPPIDVSQYG KDQVRELAAH CRSIMEQKIA ELDKEVAERE
AAGKV
|
|---|
| |