Gene EcHS_A3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3187 
Symbol 
ID5593099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3198394 
End bp3199053 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID640922306 
Producthypothetical protein 
Protein accessionYP_001459804 
Protein GI157162486 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTA TTCAAGATAT CATCGCTGCG CTCTGGCAAC ACGACTTTGC CGCGCTGGCG 
GATCCTCATA TTGTTAGCGT TGTTTACTTT GTCATGTTTG CCACGCTGTT TTTAGAAAAC
GGCCTGCTGC CCGCCTCATT TTTGCCAGGC GACAGCTTGT TGATACTGGC AGGCGCATTG
ATTGCCCAGG GGGTTATGGA TTTTCTGCCT ACGATTGCGA TTCTGACCGC CGCAGCAAGT
CTGGGCTGCT GGCTAAGTTA TATTCAGGGG CGCTGGTTAG GGAATACCAA AACGGTGAAA
GGCTGGCTGG CACAGCTTCC TGCTAAATAT CACCAGCGCG CCACCTGCAT GTTTGACCGC
CACGGTCTGC TGGCGCTGCT GGCTGGACGT TTTCTTGCAT TTGTCCGTAC GCTGCTGCCA
ACCATGGCGG GAATTTCCGG TCTGCCAAAC CGCCGCTTCC AGTTTTTCAA CTGGTTAAGT
GGATTGCTGT GGGTCAGCGT GGTAACCAGT TTTGGCTATG CCTTAAGTAT GATTCCGTTC
GTTAAACGCC ATGAAGATCA GGTAATGACG TTCCTGATGA TCCTGCCAAT TGCCTTGTTA
ACCGCTGGCT TGTTAGGCAC GCTGTTTGTG GTGATTAAAA AAAAATACTG TAACGCCTGA
 
Protein sequence
MAVIQDIIAA LWQHDFAALA DPHIVSVVYF VMFATLFLEN GLLPASFLPG DSLLILAGAL 
IAQGVMDFLP TIAILTAAAS LGCWLSYIQG RWLGNTKTVK GWLAQLPAKY HQRATCMFDR
HGLLALLAGR FLAFVRTLLP TMAGISGLPN RRFQFFNWLS GLLWVSVVTS FGYALSMIPF
VKRHEDQVMT FLMILPIALL TAGLLGTLFV VIKKKYCNA