Gene EcHS_A3186 details

Gene Information

• Locus tag: EcHS_A3186
• Symbol: metC
• ID: 5595136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3197067
• End bp: 3198254
• Gene Length: 1188 bp
• Protein Length: 395 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640922305
• Product: cystathionine beta-lyase
• Protein accession: YP_001459803
• Protein GI: 157162485
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01324] cystathionine beta-lyase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGACA AAAAGCTTGA TACTCAACTG GTGAATGCAG GACGCAGCAA AAAATACACT 
CTCGGCGCGG TAAATAGCGT GATTCAGCGC GCTTCTTCGC TGGTCTTTGA CAGTGTGGAA 
GCCAAAAAGC ACGCGACGCG CAATCGCGCC AATGGCGAGT TGTTCTATGG ACGGCGCGGA 
ACGTTAACCC ATTTCTCCTT ACAACAAGCG ATGTGTGAAC TGGAAGGTGG CGCAGGCTGC 
GCGCTATTTC CCTGCGGGGC GGCAGCGGTT GCTAATTCCA TTCTTGCTTT TGTCGAACAG 
GGCGATCATG TGTTGATGAC CAACACCGCC TATGAACCGA GTCAGGATTT CTGTAGCAAA 
ATCCTCAGCA AACTGGGCGT AACGACATCG TGGTTTGATC CGCTGATTGG TGCCGATATC 
GTTAAGCATC TGCAGCCAAA CACTAAAATC GTGTTTCTGG AATCGCCAGG CTCCATCACC 
ATGGAAGTCC ACGACGTTCC GGCGATTGTT GCCGCCGTAC GCAGTGTGGT GCCGGATGCC 
ATCATTATGA TCGACAACAC CTGGGCAGCC GGTGTGCTGT TTAAGGCGCT GGATTTTGGC 
ATCGATGTTT CTATTCAAGC CGCCACCAAA TATCTGGTTG GGCATTCAGA TGCGATGATT 
GGCACTGCCG TGTGCAATGC CCGTTGCTGG GAGCAGCTAC GGGAAAACGC CTATCTGATG 
GGCCAGATGG TCGATGCCGA TACCGCCTAT ATAACCAGCC GTGGCCTGCG CACATTAGGT 
GTGCGTTTGC GTCAACATCA TGAAAGCAGT CTGAAAGTGG CTGAATGGCT GGCAGAACAT 
CCGCAAGTAG CGCGAGTTAA CCACCCTGCT CTGCCTGGCA GTAAAGGACA CGAATTCTGG 
AAACGAGACT TTACAGGTAG CAGCGGGCTA TTTTCCTTTG TGCTTAAGAA AAAACTCAGT 
AATGAAGAGC TGGCGAACTA TCTGGATAAC TTCAGTTTAT TCAGCATGGC CTACTCGTGG 
GGCGGGTATG AATCGTTGAT CCTGGCGAAT CAACCAGAAC ATATCGCCGC CATTCGCCCA 
CAAGGCGAGA TCGATTTTAG CGGGACCTTG ATTCGCCTGC ATATTGGTCT GGAAGATGTC 
GACGATCTGA TTGCCGATCT GGACGCCGGT TTTGCGCGAA TTGTATAA 

 

Protein sequence

MADKKLDTQL VNAGRSKKYT LGAVNSVIQR ASSLVFDSVE AKKHATRNRA NGELFYGRRG 
TLTHFSLQQA MCELEGGAGC ALFPCGAAAV ANSILAFVEQ GDHVLMTNTA YEPSQDFCSK 
ILSKLGVTTS WFDPLIGADI VKHLQPNTKI VFLESPGSIT MEVHDVPAIV AAVRSVVPDA 
IIMIDNTWAA GVLFKALDFG IDVSIQAATK YLVGHSDAMI GTAVCNARCW EQLRENAYLM 
GQMVDADTAY ITSRGLRTLG VRLRQHHESS LKVAEWLAEH PQVARVNHPA LPGSKGHEFW 
KRDFTGSSGL FSFVLKKKLS NEELANYLDN FSLFSMAYSW GGYESLILAN QPEHIAAIRP 
QGEIDFSGTL IRLHIGLEDV DDLIADLDAG FARIV