Gene EcHS_A3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3185 
SymbolexbB 
ID5595135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3196081 
End bp3196815 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID640922304 
Productbiopolymer transport protein ExbB 
Protein accessionYP_001459802 
Protein GI157162484 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTAATA ATTTGATGCA GACGGACCTT TCCGTCTGGG GTATGTATCA GCACGCCGAT 
ATTGTCGTTA AGTGCGTGAT GATTGGGCTT ATTTTGGCCT CCGTAGTCAC TTGGGCAATC
TTCTTCAGTA AGAGCGTAGA ATTCTTCAAT CAGAAGCGTC GCCTTAAGCG CGAGCAGCAA
CTGCTGGCTG AAGCGCGTTC CTTAAACCAG GCCAACGATA TCGCCGCTGA TTTTGGTAGC
AAAAGCTTAA GCCTGCATTT GCTCAATGAA GCGCAGAATG AGCTGGAACT GTCAGAAGGC
AGCGACGATA ACGAAGGTAT TAAAGAACGT ACCAGCTTCC GTCTGGAGCG TCGGGTCGCC
GCAGTGGGTC GTCAAATGGG CCGCGGTAAC GGCTATCTGG CAACCATCGG CGCGATTTCT
CCGTTCGTTG GTCTGTTTGG TACGGTCTGG GGCATCATGA ACAGCTTTAT TGGTATCGCG
CAAACGCAGA CCGCTAACCT GGCAGTCGTT GCGCCGGGTA TCGCAGAAGC TCTGTTAGCA
ACGGCAATCG GCCTCGTGGC AGCGATTCCT GCGGTCGTTA TCTATAACGT ATTTGCACGC
CAGATTGGCG GCTTTAAAGC GATGCTGGGT GATGTTGCAG CGCAGGTATT GTTGCTGCAA
AGCCGTGACC TGGATCTGGA AGCCAGCGCC GCTGCGCATC CGGTTCGTGT CGCACAAAAA
TTACGCGCAG GATAA
 
Protein sequence
MGNNLMQTDL SVWGMYQHAD IVVKCVMIGL ILASVVTWAI FFSKSVEFFN QKRRLKREQQ 
LLAEARSLNQ ANDIAADFGS KSLSLHLLNE AQNELELSEG SDDNEGIKER TSFRLERRVA
AVGRQMGRGN GYLATIGAIS PFVGLFGTVW GIMNSFIGIA QTQTANLAVV APGIAEALLA
TAIGLVAAIP AVVIYNVFAR QIGGFKAMLG DVAAQVLLLQ SRDLDLEASA AAHPVRVAQK
LRAG