| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3137 |
|---|
| Symbol | gspE2 |
|---|
| ID | 5593799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3145428 |
|---|
| End bp | 3146921 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640922256 |
|---|
| Product | general secretory pathway protein E |
|---|
| Protein accession | YP_001459755 |
|---|
| Protein GI | 157162437 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCTG TAGCACAGGA AACCACCGCC AACACCGTGC GTCTGCCCTA CAGTTTCAGC
CGTCGGTTTA GCCTGGTGGC ATGGTGCGAA GCGTCGCTGG AGATCCTCCA CGTTCATCCG
CTATCGCTCT CTGTTTTGCA GGAGCTGCAG CGGGGGCTGA ACGCGCCCTT TACGCTGCGG
CAAATCGACG AGGCCGAATT TGAACAGCGG CTGAATGCGG TCTGGCAGCG GGACTCTTCC
GAGGCTCGCC AGCTGATGGA AGATCTCGGT TCTGCCGAGG ACTTTTTTAC CCTCGCGGAA
GAACTGCCGG AAACGGAAGA GCTGCTGGAA AGCGACGACG ATGCGCCGAT CATCAAACTG
ATCAACGCCA TGCTGGCAGA GGCAATCAAA GAAGGCGCTT CGGATATCCA CATTGAGACG
TTTGAAAAGA GTCTGGTGAT CCGTTTTCGT GTTGACGGCA CATTACATGA AATGCTGCGT
CCGGGGCGCA AACTGGCCTC GCTGCTGGTG TCGCGTATCA AGGTGATGGC GCGGCTGGAC
ATTGCCGAAA AGCGCGTGCC GCAGGATGGA CGTATTGCGC TGTTGCTGGG CGGCCGGGCG
ATTGACGTGC GTGTCTCCAC CATGCCTTCT GCCTGGGGCG AGCGCGTGGT GCTGCGACTG
CTGGACAAAA ACCAGGCCCG CCTGACGCTG GAGCGTCTGG GGCTTAGCCA GCAACTGACC
GCGCAGTTGC GCCAGCTGTT ACACAAACCG CACGGCATCT TTCTGGTGAC GGGGCCGACG
GGTTCCGGCA AAAGCACCAC GCTGTACGCC GGATTGCAGG AGCTGAACAA CCATTCGCGC
AACATTCTCA CGGTTGAAGA TCCCATCGAA TACATGATTG AAGGGATCGG TCAGACGCAG
GTTAACACCC GCGTCGGCAT GACCTTTGCC CGTGGGCTGC GCGCGATTTT GCGTCAGGAC
CCGGATGTGG TGATGGTCGG TGAAATCCGC GATACCGAAA CCGCAGAAAT CGCCGTCCAG
GCTTCACTTA CCGGACACCT GGTCCTTTCC ACGCTGCATA CCAACACAGC GGTGGGGGCG
ATCACACGTT TGCAGGATAT GGGCGTGGAG CCTTTCCTGC TCTCTTCCAG TCTGACGGGC
GTGATGGCGC AGCGACTGGT TCGCACGCTG TGTCCCGACT GCCGCCAGCC CGCACCAGCC
ACTGACGAAG AAAAACGCCT GCTGGGAATT ACCGACGCCC GTACCGTCAC TCTGTACCAT
CCACAGGGCT GTCCCGCCTG TAATCACAAA GGTTTTCGCG GACGGACTGC CATCCATGAG
CTGATCGTGG TGGATGCCAC ATTGCGTGAT TTGATCCACC GTCAGGCCGG GGAGCTGGAG
CTGGAACGTT ATGTCCGACA ACACTCTGCG GGTATCCGCA GCAACGGCAT TGAGAAAGTG
CTCGCCGGAG AAACCTCTCT CGATGAAGTT CTGCGGGTAA CCATGGAGGC GTAA
|
|---|
| Protein sequence | MVPVAQETTA NTVRLPYSFS RRFSLVAWCE ASLEILHVHP LSLSVLQELQ RGLNAPFTLR
QIDEAEFEQR LNAVWQRDSS EARQLMEDLG SAEDFFTLAE ELPETEELLE SDDDAPIIKL
INAMLAEAIK EGASDIHIET FEKSLVIRFR VDGTLHEMLR PGRKLASLLV SRIKVMARLD
IAEKRVPQDG RIALLLGGRA IDVRVSTMPS AWGERVVLRL LDKNQARLTL ERLGLSQQLT
AQLRQLLHKP HGIFLVTGPT GSGKSTTLYA GLQELNNHSR NILTVEDPIE YMIEGIGQTQ
VNTRVGMTFA RGLRAILRQD PDVVMVGEIR DTETAEIAVQ ASLTGHLVLS TLHTNTAVGA
ITRLQDMGVE PFLLSSSLTG VMAQRLVRTL CPDCRQPAPA TDEEKRLLGI TDARTVTLYH
PQGCPACNHK GFRGRTAIHE LIVVDATLRD LIHRQAGELE LERYVRQHSA GIRSNGIEKV
LAGETSLDEV LRVTMEA
|
|---|
| |