| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3134 |
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| Symbol | gspH2 |
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| ID | 5595253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3143166 |
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| End bp | 3143729 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640922253 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001459752 |
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| Protein GI | 157162434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 94 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTGAAC GCGGATTCAC ACTTCTGGAA ATCATGCTGG TGATTTTCCT TATCGGCCTT
GCCAGTGCGG GCGTGGTACA GACTTTTGCG ACCGATTCTG AATCGCCCGC GAAAAAAGCG
GCGCAGGATT TTCTGACTCG CTTTGCGCAG TTTAAGGACA GGGCAGTGAT CGAAGGACAA
ACACTCGGTG TGTTAATCGA CCCGCCTGGC TACCAGTTTA TGCAGCGTCG TCAGGGGCAG
TGGTTGCCCG TTTCTGCGAC CCGGTTATCA GCACAGGTTA CGGTGCCGAA ACAGGTGCAG
ATGCTGTTAC AACCCGGAAG TGATATCTGG CAGAAGGAAT ATGCGCTGGA GCTGCAACGT
CGTCGCCTGA CGCTGCACGA TATTGAACTG GAGCTGCAAA AAGAGGCGAA AAAGAAGACG
CCGCAGATCC GTTTTTCGCC TTTTGAACCC GCCACGCCGT TTACGCTGCG CTTCTACTCG
GCGGCGCAAA ACGCATGTTG GGCGGTAAAA CTGGCGCACG ATGGCGCGTT ATCCCTCAAT
CAATGTGATG AGAGGATGCC ATGA
|
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| Protein sequence | MPERGFTLLE IMLVIFLIGL ASAGVVQTFA TDSESPAKKA AQDFLTRFAQ FKDRAVIEGQ
TLGVLIDPPG YQFMQRRQGQ WLPVSATRLS AQVTVPKQVQ MLLQPGSDIW QKEYALELQR
RRLTLHDIEL ELQKEAKKKT PQIRFSPFEP ATPFTLRFYS AAQNACWAVK LAHDGALSLN
QCDERMP
|
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