Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3133 |
Symbol | gspI2 |
ID | 5593645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3142798 |
End bp | 3143169 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640922252 |
Product | general secretion pathway protein I |
Protein accession | YP_001459751 |
Protein GI | 157162433 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 101 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGCG GATTTACCTT GCTGGAAGTG ATGCTCGCGC TGGCGATTTT TGCGCTGGCT GCCACGGCGG TGTTACAGAT TGCCAGCGGT GCGCTGAGTA ATCAGCAAAT TCTTGAGGAA AAAACGGTAG CGGGCTGGGT GGCTGAAAAC CAGACCGCGC TGCTCTACCT GATGACCCGC GAGCAGCGGG CGGTCAGGCA GCAGGGCGAG AGCGATATGG CAGGAAGCCG CTGGTACTGG CGAACCACAC CGCTGAGTAC AGGCAACGCG CTGCTCCAGG CGGTGGATAT TGAAGTCAGC CTTCACGAAG ACTTTTCGCC GGTGATTCAG TCACGACGCG CCTGGTTTAG CGCCGTGGGA GGCCAACAGT GA
|
Protein sequence | MKRGFTLLEV MLALAIFALA ATAVLQIASG ALSNQQILEE KTVAGWVAEN QTALLYLMTR EQRAVRQQGE SDMAGSRWYW RTTPLSTGNA LLQAVDIEVS LHEDFSPVIQ SRRAWFSAVG GQQ
|
| |