| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3129 |
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| Symbol | gspM |
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| ID | 5593850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3139509 |
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| End bp | 3140045 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640922248 |
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| Product | putative general secretion pathway protein YghD |
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| Protein accession | YP_001459747 |
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| Protein GI | 157162429 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3149] Type II secretory pathway, component PulM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 85 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACGCG ATAAATTTAT TCACTATTTT CAGCAATGGC GTGAACGCCA GTTAAGCCGT
GGCGAACACT GGCTGGCACA ACACCTGGCG GGGCGTTCTC CGCGTGAAAA GGGCATGTTA
CTGGCAGCGG TGGTGTTCCT GTTTAGCGTC GGATATTACG TCCTCATCTG GCAGCCGTTG
AGCGAACGGA TAGAACAACA GGAGACAATG TTGCAGCAAC TGGTGGCGAT GAACACCAGA
CTGAGGAGCG CCGCGCCGGA TATTATTGCG GCGCGAAAAT CCGCCACAAC AACGCCTGCG
CAGGTATCGC GGGTTATCAG TGACAGTGCT TCCGCGCACT CGGTAGTCAT CAAGCGGATA
GCCGAGCGTG GGGAGAATAT TCAGGTCTGG ATAGATCCGG TGGTGTTTAA TGACCTGCTG
AACTGGTTAA ACGCGCTGGA TGAAAAGTAT GCGCTGCGGG TGACACAAAT TGATGCCAGT
GCTGCTGAGA AGCCTGGGAT GGTGAATGTG CAGCGGCTGG AGTTTGGACG GGGGTAA
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| Protein sequence | MLRDKFIHYF QQWRERQLSR GEHWLAQHLA GRSPREKGML LAAVVFLFSV GYYVLIWQPL
SERIEQQETM LQQLVAMNTR LRSAAPDIIA ARKSATTTPA QVSRVISDSA SAHSVVIKRI
AERGENIQVW IDPVVFNDLL NWLNALDEKY ALRVTQIDAS AAEKPGMVNV QRLEFGRG
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