| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3126 |
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| Symbol | speC |
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| ID | 5593852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3135938 |
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| End bp | 3138073 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640922245 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001459745 |
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| Protein GI | 157162427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA TGAATATTGC CGCCAGTAGT GAACTGGTAT CCCGACTTTC TTCTCATCGT
CGCGTGGTGG CGTTGGGAGA TACTGATTTT ACGGACGTCG CGGCAGTCGT CATTACCGCT
GCGGATAGTC GCAGTGGCAT TCTTGCGTTG CTTAAGCGCA CCGGTTTTCA TCTACCGGTG
TTTTTGTATT CCGAACATGC TGTAGAATTA CCTGCGGGCG TTACGGCGGT AATCAACGGC
AACGAGCAGC AGTGGCTGGA GCTGGAATCC GCAGCCTGTC AGTATGAAGA GAATTTGCTG
CCACCGTTTT ATGACACGCT GACGCAGTAC GTTGAGATGG GCAACAGCAC CTTTGCTTGC
CCTGGACATC AACATGGTGC GTTCTTTAAA AAGCATCCTG CCGGACGCCA TTTTTACGAT
TTCTTCGGTG AGAACGTCTT TCGCGCCGAT ATGTGTAATG CCGATGTGAA ACTGGGCGAT
CTGCTTATTC ATGAAGGATC GGCGAAAGAT GCGCAGAAAT TCGCAGCCAA AGTCTTTCAT
GCCGATAAAA CCTATTTTGT GCTGAACGGC ACATCGGCAG CGAATAAAGT GGTGACGAAT
GCGCTGTTAA CGCGTGGCGA TCTGGTGCTC TTCGACCGTA ACAACCATAA GTCGAATCAT
CACGGCGCGC TGATTCAGGC GGGGGCGACG CCGGTCTATC TGGAAGCTTC ACGCAACCCG
TTTGGTTTCA TTGGCGGTAT TGATGCGCAC TGTTTTAATG AAGAGTATCT GCGCCAGCAA
ATTCGCGACG TTGCGCCAGA AAAAGCCGAC CTGCCGCGCC CGTTTCGCCT GGCGATTATT
CAGCTGGGAA CCTATGACGG CACTGTCTAT AACGCCCGTC AGGTGATCGA TACCGTTGGG
CATCTGTGTG ATTACATTCT GTTTGATTCC GCGTGGGTCG GTTACGAACA ATTTATCCCG
ATGATGGCGG ATAGCTCGCC GCTGCTATTA GAACTTAACG AAAACGATCC GGGGATCTTT
GTGACTCAGT CGGTGCACAA ACAGCAGGCG GGATTCTCAC AGACGTCGCA GATCCATAAA
AAAGATAACC ATATCCGCGG ACAGGCGCGT TTTTGCCCGC ATAAGCGGTT GAATAATGCC
TTTATGCTCC ATGCTTCTAC CAGCCCGTTC TACCCGCTGT TTGCCGCCCT GGACGTTAAC
GCCAAAATTC ATGAAGGGGA GAGTGGGCGT CGGCTGTGGG CTGAGTGCGT TGAGTTGGGT
ATTGAGTCGC GCAAGGCTAT TCTTGCGCGC TGTAAGCTGT TCCGCCCGTT TATCCCGCCC
GTTGTTGATG GCAAATTGTG GCAGGATTAT CCGACATCTG TGTTAGCCAG CGACCGCCGT
TTTTTCAGTT TTGAGCCGGG GGCGAAGTGG CACGGCTTTG AAGGATATGC CGCGGATCAG
TATTTTGTTG ATCCGTGCAA GCTGTTACTC ACTACACCAG GTATCGATGC CGAAACCGGC
GAATATAGCG ACTTTGGCGT TCCGGCGACG ATTCTGGCGC ACTATCTGCG TGAGAACGGC
ATTGTGCCGG AGAAGTGCGA TCTCAACTCC ATTCTGTTTT TATTAACTCC GGCGGAAAGC
CACGAGAAGC TGGCACAACT GGTGGCGATG CTGGCGCAAT TTGAACAGCA TATTGAGGAT
GACTCGCCGC TGGTTGAGGT GTTGCCGAGC GTTTATAACA AGTATCCGGT GCGCTATCGC
GACTACACCC TGCGCCAGTT GTGTCAGGAG ATGCACGATC TGTATGTCAG TTTCGACGTC
AAAGACCTAC AAAAAGCGAT GTTCCGCCAG CAGAGTTTCC CGTCAGTGGT GATGAACCCC
CAGGATGCGC ATAGCGCTTA TATTCGCGGT GACGTGGAGT TGGTGCGGAT TCGTGATGCC
GAAGGGCGAA TTGCGGCAGA AGGGGCGTTG CCTTATCCAC CTGGCGTGCT TTGCGTGGTA
CCCGGGGAAG TCTGGGGTGG GGCGGTTCAA CGTTATTTCC TTGCACTGGA AGAAGGGGTG
AATTTGTTGC CGGGATTTTC GCCGGAGCTG CAAGGTGTTT ATAGCGAAAC CGATGCGGAT
GGCGTGAAAC GGTTGTACGG TTATGTGTTG AAGTAA
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| Protein sequence | MKSMNIAASS ELVSRLSSHR RVVALGDTDF TDVAAVVITA ADSRSGILAL LKRTGFHLPV
FLYSEHAVEL PAGVTAVING NEQQWLELES AACQYEENLL PPFYDTLTQY VEMGNSTFAC
PGHQHGAFFK KHPAGRHFYD FFGENVFRAD MCNADVKLGD LLIHEGSAKD AQKFAAKVFH
ADKTYFVLNG TSAANKVVTN ALLTRGDLVL FDRNNHKSNH HGALIQAGAT PVYLEASRNP
FGFIGGIDAH CFNEEYLRQQ IRDVAPEKAD LPRPFRLAII QLGTYDGTVY NARQVIDTVG
HLCDYILFDS AWVGYEQFIP MMADSSPLLL ELNENDPGIF VTQSVHKQQA GFSQTSQIHK
KDNHIRGQAR FCPHKRLNNA FMLHASTSPF YPLFAALDVN AKIHEGESGR RLWAECVELG
IESRKAILAR CKLFRPFIPP VVDGKLWQDY PTSVLASDRR FFSFEPGAKW HGFEGYAADQ
YFVDPCKLLL TTPGIDAETG EYSDFGVPAT ILAHYLRENG IVPEKCDLNS ILFLLTPAES
HEKLAQLVAM LAQFEQHIED DSPLVEVLPS VYNKYPVRYR DYTLRQLCQE MHDLYVSFDV
KDLQKAMFRQ QSFPSVVMNP QDAHSAYIRG DVELVRIRDA EGRIAAEGAL PYPPGVLCVV
PGEVWGGAVQ RYFLALEEGV NLLPGFSPEL QGVYSETDAD GVKRLYGYVL K
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