Gene EcHS_A3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3125 
SymbolnupG 
ID5595211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3134632 
End bp3135888 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content50% 
IMG OID640922244 
Productnucleoside permease NupG 
Protein accessionYP_001459744 
Protein GI157162426 
COG category 
COG ID 
TIGRFAM ID[TIGR00889] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTA AGCTGCAGCT GAAAATCCTC TCTTTTCTGC AGTTCTGTCT GTGGGGAAGT 
TGGCTGACGA CCCTCGGCTC CTATATGTTT GTTACCCTGA AGTTTGACGG TGCTTCTATT
GGCGCAGTTT ATAGCTCACT GGGTATCGCA GCGGTCTTTA TGCCTGCGCT GCTGGGGATT
GTGGCCGACA AATGGTTAAG TGCGAAATGG GTATATGCCA TTTGCCACAC CATTGGCGCT
ATCACGCTGT TCATGGCGGC ACAGGTCACG ACACCGGAAG CGATGTTCCT TGTGATATTG
ATTAACTCGT TTGCTTATAT GCCAACGCTT GGGTTAATCA ACACCATCTC TTACTATCGC
CTGCAAAATG CCGGGATGGA TATCGTTACT GACTTCCCGC CAATCCGTAT CTGGGGCACC
ATCGGCTTTA TCATGGCAAT GTGGGTGGTG AGCCTGTCTG GCTTCGAATT AAGCCACATG
CAGCTGTATA TTGGCGCAGC ACTTTCCGCC ATTCTGGTTC TGTTTACCCT GACTCTGCCG
CATATTCCGG TTGCTAAACA GCAAGCGAAT CAGAGCTGGA CAACCCTGCT GGGCCTCGAT
GCATTCGCGC TGTTTAAAAA CAAGCGTATG GCAATCTTCT TTATCTTCTC AATGCTGCTG
GGCGCGGAAC TGCAGATTAC CAACATGTTC GGTAATACCT TCCTGCACAG CTTCGACAAA
GATCCGATGT TTGCCAGCAG CTTTATTGTG CAGCATGCGT CAATCATCAT GTCGATTTCG
CAGATCTCTG AAACCCTGTT CATTCTGACC ATCCCGTTCT TCTTAAGCCG CTACGGTATT
AAGAACGTAA TGATGATCAG TATTGTGGCG TGGATCCTGC GTTTTGCGCT GTTTGCTTAC
GGCGACCCGA CTCCGTTCGG TACTGTACTG CTGGTACTGT CGATGATCGT TTACGGTTGC
GCATTCGACT TCTTCAACAT CTCTGGTTCG GTGTTTGTCG AAAAAGAAGT TAGCCCGGCA
ATTCGCGCCA GTGCACAAGG GATGTTCCTG ATGATGACTA ACGGCTTCGG CTGTATCCTC
GGCGGCATCG TGAGCGGTAA AGTTGTTGAG ATGTACACCC AAAACGGCAT TACCGACTGG
CAGACCGTAT GGTTGATTTT CGCTGGTTAC TCCGTGGTTC TGGCCTTCGC GTTCATGGCG
ATGTTCAAAT ATAAACACGT TCGTGTCCCG ACAGGCACAC AGACGGTTAG CCACTAA
 
Protein sequence
MNLKLQLKIL SFLQFCLWGS WLTTLGSYMF VTLKFDGASI GAVYSSLGIA AVFMPALLGI 
VADKWLSAKW VYAICHTIGA ITLFMAAQVT TPEAMFLVIL INSFAYMPTL GLINTISYYR
LQNAGMDIVT DFPPIRIWGT IGFIMAMWVV SLSGFELSHM QLYIGAALSA ILVLFTLTLP
HIPVAKQQAN QSWTTLLGLD AFALFKNKRM AIFFIFSMLL GAELQITNMF GNTFLHSFDK
DPMFASSFIV QHASIIMSIS QISETLFILT IPFFLSRYGI KNVMMISIVA WILRFALFAY
GDPTPFGTVL LVLSMIVYGC AFDFFNISGS VFVEKEVSPA IRASAQGMFL MMTNGFGCIL
GGIVSGKVVE MYTQNGITDW QTVWLIFAGY SVVLAFAFMA MFKYKHVRVP TGTQTVSH