Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3104 |
Symbol | |
ID | 5593551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3118773 |
End bp | 3119504 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640922223 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001459723 |
Protein GI | 157162405 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCC CCCGCATTTA TCATCCTGAA CCACTGACCA GCCATTCTCA CATCGCGCTT TGCGAAGATG CCGCCAACCA TATCGGGCGC GTACTGCGCA TGGGGCCGGG GCAGGCGTTG CAATTGTTTG ACGGTAGCAA CCAGGTCTTT GACGCCGAAA TTACCAGCGC CAGCAAAAAA AGCGTGGAAG TGAAGGTGCT GGAAGGCCAG ATCGACGATC GCGAATCTCC GCTGCATATT CACCTCGGTC AGGTGATGTC GCGTGGTGAA AAAATGGAAT TTACTATCCA GAAATCGATC GAACTCGGTG TAAGCCTCAT TACGCCACTT TTTTCTGAGC GCTGCGGCGT TAAACTGGAT AGTGAACGTC TGAACAAGAA GCTTCAGCAG TGGCAGAAGA TTGCAATTGC TGCCTGTGAG CAGTGTGGTC GTAACCGGGT GCCGGAAATC CGTCCAGCGA TGGATCTGGA AGCCTGGTGT GCAGAGCAGG ATGAAGGACT GAAACTGAAT CTTCACCCGC GCGCCAGTAA CAGCATCAAT ACGTTGCCGT TACCGGTTGA ACGCGTCCGC CTGCTGATTG GCCCGGAAGG CGGTTTATCG GCAGATGAAA TTGCCATGAC TGCCCGCTAT CAATTTACTG ATATCCTGTT GGGACCTCGC GTTTTGCGTA CAGAGACAAC TGCGCTCACC GCCATTACCG CGCTACAAGT ACGATTTGGC GATTTGGGCT AA
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Protein sequence | MRIPRIYHPE PLTSHSHIAL CEDAANHIGR VLRMGPGQAL QLFDGSNQVF DAEITSASKK SVEVKVLEGQ IDDRESPLHI HLGQVMSRGE KMEFTIQKSI ELGVSLITPL FSERCGVKLD SERLNKKLQQ WQKIAIAACE QCGRNRVPEI RPAMDLEAWC AEQDEGLKLN LHPRASNSIN TLPLPVERVR LLIGPEGGLS ADEIAMTARY QFTDILLGPR VLRTETTALT AITALQVRFG DLG
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