Gene EcHS_A3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3087 
Symbol 
ID5594142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3102197 
End bp3102706 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content49% 
IMG OID640922206 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001459706 
Protein GI157162388 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGC TGACAGAAGA TGATGTGCTT GAGCAACTGG ATGCACAGGA CAATTTATTT 
TCATTTATGA AAACTGCGCA TACCATTTTG CTCCAGGGGA TACGCCAGTT TCTGCCGTCG
CTGTTTGTCG ATAACGATGA AGAGATCGTG GAATATGCAG TGAAGCCGTT ACTCGCCCAA
AGCGGCCCGC TTGACGATAT TGATGTTGCA CTGCGTTTGA TTTATGCGTT GGGGAAAATG
GATAAATGGT TGTACGCCGA TATCACGCAT TTTTCCCAGT TCTGGCATTA CCTGAACGAA
CAGGATGAAA CGCCCGGATT TGCCGATGAC ATGACCTGGG ATTTTATCAG CAACGTCAAT
AGCATAACCT GCAATGCGAC GCTCTATGAC GCGTTGAAAG CGATGAAGTT CGCCGATTTC
GCCGTCTGGT CAGAGGCGCG TTTTAGCGGA ATGGTCAAAA CGGCGCTGAC GCTGGCAGTA
ACGACCACCT TAAAGGAATT AACGCCGTGA
 
Protein sequence
MATLTEDDVL EQLDAQDNLF SFMKTAHTIL LQGIRQFLPS LFVDNDEEIV EYAVKPLLAQ 
SGPLDDIDVA LRLIYALGKM DKWLYADITH FSQFWHYLNE QDETPGFADD MTWDFISNVN
SITCNATLYD ALKAMKFADF AVWSEARFSG MVKTALTLAV TTTLKELTP