Gene EcHS_A3072 details

Gene Information

• Locus tag: EcHS_A3072
• Symbol: rpiA
• ID: 5593995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3086177
• End bp: 3086836
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640922191
• Product: ribose-5-phosphate isomerase A
• Protein accession: YP_001459691
• Protein GI: 157162373
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.0011211
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAGG ATGAATTGAA AAAAGCAGTA GGATGGGCGG CACTTCAGTA TGTTCAGCCC 
GGCACCATTG TTGGTGTAGG TACAGGTTCC ACCGCCGCAC ACTTTATTGA CGCGCTCGGT 
ACAATGAAAG GCCAGATTGA AGGGGCCGTT TCCAGTTCAG ATGCTTCCAC TGAAAAACTG 
AAAAGCCTCG GCATTCACGT TTTTGATCTC AACGAAGTCG ACAGCCTTGG CATCTACGTT 
GATGGCGCAG ATGAAATCAA CGGCCACATG CAAATGATCA AAGGCGGCGG CGCGGCGCTG 
ACCCGTGAAA AAATCATTGC TTCGGTTGCA GAAAAATTTA TCTGTATTGC AGACGCTTCC 
AAGCAGGTTG ATATTCTGGG TAAATTCCCG CTGCCAGTAG AAGTTATCCC GATGGCACGT 
AGTGCAGTGG CGCGTCAGCT GGTGAAACTG GGCGGTCGTC CGGAATACCG TCAGGGCGTG 
GTGACCGATA ATGGCAACGT GATCCTCGAC GTCCACGGCA TGGAAATCCT TGACCCGATA 
GCGATGGAAA ACGCCATAAA TGCGATTCCT GGCGTGGTGA CTGTTGGCTT GTTTGCTAAC 
CGTGGCGCGG ACGTTGCGCT GATTGGCACA CCTGACGGTG TCAAAACCAT TGTGAAATGA 

 

Protein sequence

MTQDELKKAV GWAALQYVQP GTIVGVGTGS TAAHFIDALG TMKGQIEGAV SSSDASTEKL 
KSLGIHVFDL NEVDSLGIYV DGADEINGHM QMIKGGGAAL TREKIIASVA EKFICIADAS 
KQVDILGKFP LPVEVIPMAR SAVARQLVKL GGRPEYRQGV VTDNGNVILD VHGMEILDPI 
AMENAINAIP GVVTVGLFAN RGADVALIGT PDGVKTIVK