Gene EcHS_A3048 details

Gene Information

• Locus tag: EcHS_A3048
• Symbol: idi
• ID: 5592153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3060579
• End bp: 3061127
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640922165
• Product: isopentenyl-diphosphate delta-isomerase
• Protein accession: YP_001459667
• Protein GI: 157162349
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1443] Isopentenyldiphosphate isomerase
• TIGRFAM ID: [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACGG AACACGTCAT TTTATTGAAT GCACAGGGAG TTCCCACGGG TACGCTGGAA 
AAGTATGCCG CACACACGGC AGACACCCTC TTACATCTCG CGTTCTCCAG TTGGCTGTTT 
AATGCCAAAG GACAATTATT AGTTACCCGC CGCGCACTGA GCAAAAAAGC ATGGCCTGGC 
GTGTGTACTA ACTCGGTTTG TGGGCACCCA CAACTGGGAG AAAGCAACGA AGACGCAGTG 
ATCCGCCGTT GCCGTTATGA GCTTGGCGTG GAAATTACGC CTCCTGAATC TATCTATCCT 
GACTTTCGCT ACCGCGCTAC CGATCCGAGT GGCATTGTGG AAAATGAAGT GTGTCCGGTA 
TTTGCCGCAC GCACGACCAG TGCGTTACAG ATCAATGATG ATGAAGTGAT GGATTATCAA 
TGGTGTGATT TAGCAGATGT ATTACACGGT ATTGATGCCA CGCCGTGGGC GTTCAGTCCG 
TGGATGGTGA TGCAGGCAGC CAATAGTGAA GCAAGAAAAT TGTTGTCTGC TTTCGCGCAG 
CACAATTAA 

 

Protein sequence

MQTEHVILLN AQGVPTGTLE KYAAHTADTL LHLAFSSWLF NAKGQLLVTR RALSKKAWPG 
VCTNSVCGHP QLGESNEDAV IRRCRYELGV EITPPESIYP DFRYRATDPS GIVENEVCPV 
FAARTTSALQ INDDEVMDYQ WCDLADVLHG IDATPWAFSP WMVMQAANSE ARKLLSAFAQ 
HN