| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3019 |
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| Symbol | epaO |
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| ID | 5594445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3022339 |
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| End bp | 3023286 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640922136 |
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| Product | surface presentation of antigens protein SpaO |
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| Protein accession | YP_001459639 |
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| Protein GI | 157162321 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.000335444 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGGTC TGAGGAAAGT AAATCGAAAC ACTCATACGT TTGAAACCAC TTTTCAAAAT
TGGAAAGAAA ATGGCGAAGA TGTTGCATTA TTAATGCCCG AATTTAGTGC TAAATGGCTA
CCGATAGCAG AAGAGAGTGG CAGCTGGTCT GGATGGGTAT TGCTTGGAGA AATATTTCCC
TTAATTTCAT CTGAGCTCGC TGGGATGGCT TTAATGCCAG AAACGGAAAG GTTAATAGGG
GAATGGCTCA GTTTATCCAG TTCCCCGTTA AATCTAAAGC ATCCTGAACT AAAATATAAT
CGTTTGCGCG TAGGTAAAGT ATTTGATGGA GTATTGAGCT CTGCTCAACC ACTAATAAGA
ATATGGACAG GGGAATTGAA TCTTTGGTTA GATAAAGTCA CAGTCTGCCA ATACGGAAAC
GCTCCAGCGT TAGACAAAAA ATCGTTATAT TGCTCCATTC ATTTTGTAAT TGGATTTAGT
AAAACATGTT ACAGAAGTCT TGTTGATATT GAAGTTGGTG ATGTTTTATT AATCTCAAAT
AATTTGGCTT ATGCGGTTAT TTATAATACA AAAATTTTTG ATTTAATTTA TCCAGAGGAG
TTAAAAATGG CTGATCATTT TGAGTACGAG GAAGATTTTG AAACAGATGA TTTTGATATC
AAAAAAAACG AGAGTGAGAT TTATGATGAA AATGACGATC AGATGATTAA TAGTTTTGAA
GACTTGCCTG TAAAAATTGA GTTTGTTCTT GGTAAGAAAA TAATGAATCT ATATGAAATA
GACGAACTCT GTGCAAAAAG AATAATATCT CTGCTTTCTG AATCTGAGAA AAATATAGAA
ATACGTGTAA ATGGCGCGCT AACTGGCTAT GGAGAACTTG TTGAAGTGGA TGATAAATTG
GGCGTAGAGA TTCATTCTTG GTTATCAGGG CATAATAATG TCAAATAG
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| Protein sequence | MFGLRKVNRN THTFETTFQN WKENGEDVAL LMPEFSAKWL PIAEESGSWS GWVLLGEIFP
LISSELAGMA LMPETERLIG EWLSLSSSPL NLKHPELKYN RLRVGKVFDG VLSSAQPLIR
IWTGELNLWL DKVTVCQYGN APALDKKSLY CSIHFVIGFS KTCYRSLVDI EVGDVLLISN
NLAYAVIYNT KIFDLIYPEE LKMADHFEYE EDFETDDFDI KKNESEIYDE NDDQMINSFE
DLPVKIEFVL GKKIMNLYEI DELCAKRIIS LLSESEKNIE IRVNGALTGY GELVEVDDKL
GVEIHSWLSG HNNVK
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