| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3017 |
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| Symbol | epaQ |
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| ID | 5593753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3021414 |
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| End bp | 3021674 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640922134 |
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| Product | type III secretion apparatus protein EpaQ |
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| Protein accession | YP_001459637 |
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| Protein GI | 157162319 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.000282862 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGATA TTGTTTTTGC GGGGAATAGG GCGCTGTATC TGATTTTAGT TATGTCTGCA
GGACCTATTG CAGTTGCGAC ATTTGTTGGT TTATTGGTAG GGCTTTTTCA AACGGTAACA
CAGTTACAAG AACAGACGTT GCCATTTGGC GTCAAATTAT TATGCGTAAG TATTTGCTTT
TTTTTAATGA GCGGATGGTA TGGTGAAAAA TTATATTCGT TTGGTATCGA AATGCTGAAT
TTAGCATTCG CGAGAGGATA G
|
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| Protein sequence | MDDIVFAGNR ALYLILVMSA GPIAVATFVG LLVGLFQTVT QLQEQTLPFG VKLLCVSICF
FLMSGWYGEK LYSFGIEMLN LAFARG
|
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