Gene EcHS_A2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2994 
Symbol 
ID5591217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3006823 
End bp3007632 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID640922115 
Producttranscriptional regulatory protein, C terminal 
Protein accessionYP_001459618 
Protein GI157162300 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000000031675 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTGGA TTATTAACGA TAATATCGAG TTCTGGCCTG AGCACCGAAA ATTAATATCG 
GTACATAACG CCGATCTTAA CGTCGTTCTG ACAACGCCAG CCAGTCGATG TTTATCACTT
CTACTTGAAG CTTTTCCTGA TGTGGTTGCA CAACAAGATT TTTTCACCAG AGTCTGGGAA
GAAGAAGGTA TGCGTGTGCC TACTAACACG TTATATCAGA ACATATCCAT TATCAGACGC
GGATTTCGCG CTGTTGGTGA TACTACCCAC TCGCTAATTG CAACCGTGCC GAGAAGAGGA
TTCAAGATCC ATAATGACAT TAACATACAA AATCATGTAA TAAACTCGTC AACAGACGCA
CATACACACA ATGCCCCACC TGCCATAAAA GTTAATGCGG GATACAAAGA GAGCATTGGT
GGCGCAAAGA ATTTCAATAA CAAAATCCTC AAACATATAA AAAGTCATCT AATTATGTTG
AGCGCATTTG TCATAGGCGC ATATTCTGCA TATTGGCTAT GGAATAATAA TCAACCGAAG
CCATTTTTCA AGGATTACAA GATTGTTGCG GAAATTAATG GCTGCCATTT TAATGTAACA
GAAGATACAA TTGATGGGTT GAAAGAGTTC GATAAATATA AAACACGGAT ACTGGATTCG
GGGATTAACT GTAAAAAACA TCCGTGGTTA TACTTCCCTC TTGCAAAATC CTCACCGGGG
ATGATTGTTA TGGCATGCAA TAAAAACTAT AACCAACATG AAGTGGCAGA CTGTTTAACC
CTGTCTTACC GTGAGGTTAA TCGTGATTGA
 
Protein sequence
MYWIINDNIE FWPEHRKLIS VHNADLNVVL TTPASRCLSL LLEAFPDVVA QQDFFTRVWE 
EEGMRVPTNT LYQNISIIRR GFRAVGDTTH SLIATVPRRG FKIHNDINIQ NHVINSSTDA
HTHNAPPAIK VNAGYKESIG GAKNFNNKIL KHIKSHLIML SAFVIGAYSA YWLWNNNQPK
PFFKDYKIVA EINGCHFNVT EDTIDGLKEF DKYKTRILDS GINCKKHPWL YFPLAKSSPG
MIVMACNKNY NQHEVADCLT LSYREVNRD