Gene EcHS_A2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2987 
Symbol 
ID5595461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp2998264 
End bp2998956 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content51% 
IMG OID640922108 
Productputative racemase 
Protein accessionYP_001459611 
Protein GI157162293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TTGGTTTGCT GGGAGGAATG AGCTGGGAAT CCACCATTCC TTACTATCGT 
TTGATAAATG AAGGCATTAA ACAGCGGCTT GGTGGGCTTC ACTCTGCGCA AGTGCTGCTA 
CATAGCGTCG ATTTTCATGA AATAGAAGAG TGCCAGCGTC GCGGGGAATG GGATAAAACC 
GGGGACATTC TGGCTGAGGC GGCGCTTGGC TTACAGCGGG CGGGCGCAGA AGGTATTGTG 
TTATGTACCA ATACGATGCA TAAAGTGGCG GATGCCATTG AGTCACGTTG CACTCTGCCT 
TTCTTACACA TTGCGGATGC CACCGGACGT GCAATTACCG GGGCCGGAAT GACTCGTGTG 
GCGCTGCTGG GTACGCGTTA CACCATGGAA CAGGATTTTT ATCGCGGGCG GCTGACGGAA 
CAATTTTCCA TCAATTGTCT TATTCCTGAA GCGGATGAAC GGGCGAAAAT TAATCAGATT 
ATTTTTGAAG AACTGTGTCT GGGGCAATTT ACCGAAGCGT CACGCGCTTA TTATGCGCAA 
GTGATTGCTC GCCTTGCAGA ACAGGGCGCA CAGGGCGTCA TTTTTGGCTG CACAGAAATT 
GGTTTACTGG TGCCAGAAGA GCGCAGTGTT TTGCCTGTGT TTGATACCGC GGCGATCCAT 
GCCGAGGATG CTGTCGCTTT TATGCTGTCG TAG
 
Protein sequence
MKTIGLLGGM SWESTIPYYR LINEGIKQRL GGLHSAQVLL HSVDFHEIEE CQRRGEWDKT 
GDILAEAALG LQRAGAEGIV LCTNTMHKVA DAIESRCTLP FLHIADATGR AITGAGMTRV 
ALLGTRYTME QDFYRGRLTE QFSINCLIPE ADERAKINQI IFEELCLGQF TEASRAYYAQ 
VIARLAEQGA QGVIFGCTEI GLLVPEERSV LPVFDTAAIH AEDAVAFMLS